Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00316 ATGAGATGTACATTTAAAATTTTGCTTTACAAAACCCTCTCTGTACTTGAATTGTCAACTTCTAAGAACACGACCATCACTCCTTCCTCCAGCACTTTCTTTCATTCTTCATCTCACTATATAAATGCACATACCCATATTAACAACTTCCCCACACCAAAACTTTTCTCCCTTGTTCTCACTATACAACACAAACCCCTTTTCTTTCTTTTTTTGTCACAAGCGTTGTGTTGCATTGAGGAAGTAAAACTAGCCAAACCAGCAATGGCATCCAGGAGGAACTCGGTTGTTTTTGAGGACTACTTCCCTGCAATGATGGAGAAACTGGGCACTGATGGGTTCATGAAGGAGCTCACAAATGGTTTTCAGTTGTTGATGGACAGAGAGAAGAAGGTGATAACGTTTGAGAGCTTGAAGAGGAACTCTGCATTGCTTGGGTTGGAAGGGATGAATGATGATGAGTTAAGGTGCATGCTAAGAGAAGGTGATCTTGATGGTGATGGAGCACTCGATGAGATGGAGTTCTGCACCCTCATGTTCAGGTTGAGTCCTGCTTTGATGAACAATTCCAAGGAACTTTTGGAGGAAGCCATTTTCTCTTCTCATTAG 609 0.4171 MRCTFKILLYKTLSVLELSTSKNTTITPSSSTFFHSSSHYINAHTHINNFPTPKLFSLVLTIQHKPLFFLFLSQALCCIEEVKLAKPAMASRRNSVVFEDYFPAMMEKLGTDGFMKELTNGFQLLMDREKKVITFESLKRNSALLGLEGMNDDELRCMLREGDLDGDGALDEMEFCTLMFRLSPALMNNSKELLEEAIFSSH 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00316 202 ProSiteProfiles EF-hand calcium-binding domain profile. 150 185 IPR002048 GO:0005509
Phco11g00316 202 PANTHER CALCIUM-BINDING PROTEIN KIC 96 198 IPR044205 GO:0005509
Phco11g00316 202 Gene3D - 96 202 - -
Phco11g00316 202 ProSitePatterns EF-hand calcium-binding domain. 163 175 IPR018247 -
Phco11g00316 202 Pfam EF-hand domain pair 129 181 IPR002048 GO:0005509
Phco11g00316 202 SUPERFAMILY EF-hand 94 179 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00316 Phco-Chr11 2048017 2048625 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00316 11 2048017 2048625 Phco11g00316 11 2048017 2048625 ECH