Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00279 ATGGGGCTGTGCAAGATTTCATTTTGTATAGTGTGTGTGTTAGGGTTGGTGAGTGTTGGTGATGTTGCCTACGCTCAAGACTCAGCAGAGGACTACGTGAATGAACATAACGCTGCAAGGTCAGATGTTGGTGTTCCAAATATTGTTTGGGATAATACAGTTGCTGCTTTCGCACAAGACTATGCAAATCAACGCATAGGTGACTGCAATCTGATCCACTCTGGTGGTGGAGGAAAATATGGGGAGAATCTTGCAGGAAGCACTGGTGACCTAAGTGGGAAAGATGCAGTGAAGTTGTGGGTGGATGAGAAATCATACTATGACTACAATTCCAACTCTTGTGCTGCCGGCCAACAGTGCGGACACTACACTCAGGTTGTTTGGAAGAACTCTGTACGCGTTGGATGTGCCAAAGTAAGATGCAACAATGGAGGCACTTTCATCGGTTGCAACTATGATCCCCCTGGCAACTATGTTGGTCAAAAACCCTACTAA 495 0.4586 MGLCKISFCIVCVLGLVSVGDVAYAQDSAEDYVNEHNAARSDVGVPNIVWDNTVAAFAQDYANQRIGDCNLIHSGGGGKYGENLAGSTGDLSGKDAVKLWVDEKSYYDYNSNSCAAGQQCGHYTQVVWKNSVRVGCAKVRCNNGGTFIGCNYDPPGNYVGQKPY 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00279 164 Pfam Cysteine-rich secretory protein family 34 152 IPR014044 -
Phco11g00279 164 ProSitePatterns CRISP family signature 1. 121 131 IPR018244 GO:0005576
Phco11g00279 164 FunFam Putative pathogenesis-related protein 1 26 164 - -
Phco11g00279 164 CDD CAP_PR-1 29 164 - -
Phco11g00279 164 PRINTS Allergen V5/Tpx-1 family signature 96 109 IPR001283 -
Phco11g00279 164 PRINTS Allergen V5/Tpx-1 family signature 120 136 IPR001283 -
Phco11g00279 164 PRINTS Allergen V5/Tpx-1 family signature 48 66 IPR001283 -
Phco11g00279 164 PRINTS Allergen V5/Tpx-1 family signature 147 160 IPR001283 -
Phco11g00279 164 SUPERFAMILY PR-1-like 7 164 IPR035940 -
Phco11g00279 164 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 30 161 IPR001283 -
Phco11g00279 164 ProSitePatterns CRISP family signature 2. 147 158 IPR018244 GO:0005576
Phco11g00279 164 SMART SCP_3 27 160 IPR014044 -
Phco11g00279 164 Gene3D CAP 27 164 IPR035940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00279 Phco-Chr11 1835776 1836270 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00279 11 1835776 1836270 Phco11g00279 11 1835776 1836270 ECH
Phco4g02495 4 46118003 46118476 Phco11g00279 11 1835776 1836270 PCT