Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00261 ATGGGGAAAAAACGTGTAATGTTGCCAGCTAAGGACGTTGACTTGTCCTCAATTAAGTACGAACGTGAAGTGGTTCAAGCTCCGCATTTGACTGGATTTGTGTTTAGATTATTTGTGAGGATACTTGAACTTCCGCTGATCGGCCCTATCATAATTAATGTTTTGAAGAAGCAAAATAAAATTGACCAGATATTGCAGCACACTGTAATACCTGAGGAACCCATGTTTAAGCCTGAATATCCACCTCAAGAAACGGAGCCTGGTGTTGTTGTCCTTGAAGAAGATGGGAGACCTGAAGATCGAGTTCTGTCTGCCTTGAAGTGTCTTCCACATTATGATGTTGCTGAATTATGGGAAAATTCATATGCATCCTTTCGATACTGGAAAATACGCGACTATGCTCATGCTTATCGATCTAGAAAAGTAACCCCATCCATGGTTGCCGAGCACATAATCTCCATTATAGAGGAGAATGGAGGAAATAAACCTCCTATACCACTATTGATATCCTTTGTGGCTGCAGAAGTCCGAGAGCAGGCGGCAGCATCTACTCAGAGGTTTGAAGCAGGAAATCCATTATCGATATTGGATGGAATTTTTATGGCCATCAAAGATGACATAGATTGTTATCCTCATCCATCTAAGGGAGCATCAACATGGATGCATGAGGTACGTACTGTAAAGAAGGATGCAGTCTGTGTTTCAAGACTGCGAAGCTGCGGTGTCATATTCGTAGGGAAAGCAAATATGCATGAGTTAGGAATGGGTACAACAGGAAATAATCCTAATTATGGAACTGCAAGAAATCCTCATGCACCTGATCGGTATACTGGTGGATCTTCTTCAGGTCCAGCTGCAATTGTTGCTTCTGGAATATGTTCTGCTGCATTGGGAACTGATGGTGGAGGTTCAATCCGTATTCCTTCTTCCCTTTGTGGTGTGGTGGGATTGAAGACAACATATGGGCGGACAAGCATGGAGGGGTCATTATGCGATTCTGGGACTGTGGAAATTATTGGTCCCATTGCTTCATCAGTGGAGGATGTCATGCTAGTGTATGCGGCAATGTTGGGAGCATCGCCTGCAAGTAGAATCAGTTTAAGACCGTCACCACCTTGTTTGCCAACTCTGTCATCCAATGACTATTCAAATGCCTTGGGATCTTTAAGAATAGGAAAGTACACTCCGTGGTTTAATGACGTGCATTCAACTGAAATATCTGATAAATGCGAGGATGCACTTAATCTACTGTCAAAGGAGCATGGTTGTGAAATGATAGAAATTGTTATACCAGAGCTTCTTGAGATGCGAACTGCGCATGTCGTTTCCATTGGGTCTGAATGCTTATGTTCGCTGAATCCTGATTGTGAAGACGGGAAAGGTGTAAAATTGGCATATGATACTCGGACAAGTTTGGCTCTTTTTCGGTCATTTACAGCAGCAGATTATGTTGCAGCCCAATGTATCAGACGAAGAAATATGTATTATCACATGGAGATTTTCAAGAAAGTGGATGTCATAGTAACTCCGACAACTGGCATGACAGCACCCAGAATACCTCCTAGTGCTCTTAAAAGTGGTGAAACAGATATGCAGACTGCAGCTAACCTTATGCAGTTCGTTGTCCCTGCAAATCTTCTGGGACTGCCTGCCATTTCTGTCCCGGTTGGTTACGATCAAGAGGGACTTCCAATAGGTTTGCAAATAATGGGTCGACCATGGGCGGAAGCTACTATTCTGCGGGTAGCCTCTGCAGTTGAGAAACTCTGCGGTGAGTCAAAGAAAAAGCCCGCGTCATACTATGATGTTCTGAAGGCCAACTGA 1824 0.4348 MGKKRVMLPAKDVDLSSIKYEREVVQAPHLTGFVFRLFVRILELPLIGPIIINVLKKQNKIDQILQHTVIPEEPMFKPEYPPQETEPGVVVLEEDGRPEDRVLSALKCLPHYDVAELWENSYASFRYWKIRDYAHAYRSRKVTPSMVAEHIISIIEENGGNKPPIPLLISFVAAEVREQAAASTQRFEAGNPLSILDGIFMAIKDDIDCYPHPSKGASTWMHEVRTVKKDAVCVSRLRSCGVIFVGKANMHELGMGTTGNNPNYGTARNPHAPDRYTGGSSSGPAAIVASGICSAALGTDGGGSIRIPSSLCGVVGLKTTYGRTSMEGSLCDSGTVEIIGPIASSVEDVMLVYAAMLGASPASRISLRPSPPCLPTLSSNDYSNALGSLRIGKYTPWFNDVHSTEISDKCEDALNLLSKEHGCEMIEIVIPELLEMRTAHVVSIGSECLCSLNPDCEDGKGVKLAYDTRTSLALFRSFTAADYVAAQCIRRRNMYYHMEIFKKVDVIVTPTTGMTAPRIPPSALKSGETDMQTAANLMQFVVPANLLGLPAISVPVGYDQEGLPIGLQIMGRPWAEATILRVASAVEKLCGESKKKPASYYDVLKAN 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00261 607 ProSitePatterns Amidases signature. 278 309 IPR020556 -
Phco11g00261 607 PANTHER TRANSAMIDASE 123 604 IPR000120 GO:0003824
Phco11g00261 607 SUPERFAMILY Amidase signature (AS) enzymes 106 590 IPR036928 -
Phco11g00261 607 Pfam Amidase 169 580 IPR023631 -
Phco11g00261 607 Gene3D Amidase signature (AS) domain 130 590 IPR036928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00261 Phco-Chr11 1708324 1715860 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00261 11 1708324 1715860 Phco11g00261 11 1708324 1715860 ECH