Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g02057 ATGAGCTCCACATTACTATTCCAATTCCAATTGCCTGGATTTGGTAAGTGGGCCCAATCCAACATTGCATTGGAAACCTTAAAAACCAAGTCACATAATACAACGTATCATTGTGGTTTGGAGGGAACAGAGATGCTCATCAACGTCAAGCAATCCACCATGGTGCGTCCGGCGGAGGAGACGCCGCGGAGGCCGCTGTGGAATTCCAACGTCGATTTGGTGGTGCCAAACTTCCACACTCCCAGCGTCTATTTCTATAGGCCAAGCGGGGCCTCCAATTTCTTCGACACCACCGTTATGAAGGTGGCACTCAGCAAGGCCCTCGTCCCTTTCTACCCAATGGCCGCCCGCCTCCGCCGCGACGACGACGGCCGCATCGAGCTTTTCTGCGACGGTCAGGGAGTGCTCTTCGTCGAGGCTGACACCACCGCCGCCATCGACGACTTCGGCGACTTCTCACCCACCCTTGAGCTCCGGCAGCTCATCCCCACCGTGGATTATTCTGCCGGGATCGAAACGTACCCGCTCCTAGTGCTACAGGTAACATATTTCAAATGTGGAGGGGTGTCACTAGGTGTTGGTATGCAACACCATGTAGCAGATGGAGCATCTGGTCTTCACTTCATCAATGCATGGTCAGATGTTGCTCGTGGCTCCGATATTTCCCTCCCTCCATTCATCGACAGGACACTGCTCCGTGCCCGGGATCCACCTCGTCCTGTTTTTTATCACATTGAATACAGGCCTCCACCAGCCATGAAAACCACCCTGCAACCCTCGAAACCAGGCTCTGACGGTGCCGTTGCCGTCTCTAGTTTCAAATTGAGCCGTGACCAACTGAACACCCTCAAGGGTAAGTCCAGAGAAGATGGGAACTCAATCAGCTATAGCTCTTATGAGATGCTGGCTGGTCATGTATGGAGAAGTGTGTGCAAGGCAAGAGCACTACCTGATGAGCAAGAAACCAAATTGTACATTGCAACTGATGGAAGGTCAAGGCTGCAACCTCCCCTCCCCCCTGGTTACTTTGGCAATGTCATCTTTACCACCACTCCTGTAGCAGTGGCTGGCGACCTCATGTCAAAACCAACATGGTATGCTGCAAGCAGAATCCACGATGCATTAATGAGAATGGACAACGAATATTTGAGATCAGCTCTTGACTATCTAGAGCTGCAGCCTGATCTAAAAGCGCTTGTTCGTGGATCACACACTTTTAGGTGTCCAAACCTTGGCATCACTAGCTGGGTAAGGCTTCCAATCCATGATGCTGACTTTGGTTGGGGAAGACCCATTTTCATGGGACCTGGTGGCATTGCCTACGAGGGGCTATCTTTCATTATTCCTAGCTCAACAAACGATGGCAGCATGTCTGTGGCAATCGCTCTTCCTCCTGACCGAATGAAAGTGTTTCAGGATTTGTTTTATGACTTTTGA 1437 0.5115 MSSTLLFQFQLPGFGKWAQSNIALETLKTKSHNTTYHCGLEGTEMLINVKQSTMVRPAEETPRRPLWNSNVDLVVPNFHTPSVYFYRPSGASNFFDTTVMKVALSKALVPFYPMAARLRRDDDGRIELFCDGQGVLFVEADTTAAIDDFGDFSPTLELRQLIPTVDYSAGIETYPLLVLQVTYFKCGGVSLGVGMQHHVADGASGLHFINAWSDVARGSDISLPPFIDRTLLRARDPPRPVFYHIEYRPPPAMKTTLQPSKPGSDGAVAVSSFKLSRDQLNTLKGKSREDGNSISYSSYEMLAGHVWRSVCKARALPDEQETKLYIATDGRSRLQPPLPPGYFGNVIFTTTPVAVAGDLMSKPTWYAASRIHDALMRMDNEYLRSALDYLELQPDLKALVRGSHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSMSVAIALPPDRMKVFQDLFYDF 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g02057 478 Gene3D - 263 478 IPR023213 -
Phco10g02057 478 Gene3D - 42 249 IPR023213 -
Phco10g02057 478 Pfam Transferase family 47 476 - -
Phco10g02057 478 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 51 475 - -
Phco10g02057 478 FunFam Spermidine hydroxycinnamoyl transferase 45 247 - -
Phco10g02057 478 FunFam Tryptamine hydroxycinnamoyl transferase 255 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g02057 Phco-Chr10 42145943 42150826 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g02057 10 42145943 42150826 Phco1g00045 1 370375 372945 PCT