Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g02003 ATGGCTTCCGGCGCTGCTGCGGAAAACATGAACGAGGTGGGACCTGGATACGTTTTCAAAGAAGAGATCCATCTCACCGTCCTCAAAACCTCTCTGTTCTTCGCCGGCGATGGCTTCACCGTCTACGACTGCAAAGGTCAACTCGTCTTCCGAGTTGACTCATACGGACCCGACACTCGCGACAGAGACGAACTCGTTCTCATGGATCCTAACGGACGTTGTCTCCTCACTGTTCGTCGAAAGAGGCCGAGTTTGCATCAACGGTGGGAGGGCTTCAAAGGGGAGAGAGTGGACGGTGATAAACCTATCTTCAGCGTGAAGAGAGCGTCGATCATTGGACGGGCGCGTGCGAATTTGACGGTGGAGATGTACGATAAACCGGGTGAGGAGTACCAGATCGAAGGGTGCTTCTCGCAGCGATGCTGCACGGTCTTCAATGTGACGAAGGAATCTGTGGCTGAGATTCGACGTAAGGTGGACCCCACCACTAGCGTCGTGCTTGGTAGGGAAGTGTTCTCTCTTTGTGTTAAGGCTGGTTTTGACGCGGCTTTTGCCATGGGATTTGTGCTGGTTCTCGATCAGATCAACGGTGAGGACTACGTTGATAGTGGTGCGACCACGGAGCCTGCGGTGCACCCAGCCACAGAAGATTGA 654 0.5398 MASGAAAENMNEVGPGYVFKEEIHLTVLKTSLFFAGDGFTVYDCKGQLVFRVDSYGPDTRDRDELVLMDPNGRCLLTVRRKRPSLHQRWEGFKGERVDGDKPIFSVKRASIIGRARANLTVEMYDKPGEEYQIEGCFSQRCCTVFNVTKESVAEIRRKVDPTTSVVLGREVFSLCVKAGFDAAFAMGFVLVLDQINGEDYVDSGATTEPAVHPATED 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g02003 217 PANTHER - 24 196 IPR007612 -
Phco10g02003 217 Gene3D - 13 201 IPR038595 -
Phco10g02003 217 Pfam LURP-one-related 12 191 IPR007612 -
Phco10g02003 217 SUPERFAMILY Tubby C-terminal domain-like 12 196 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g02003 Phco-Chr10 41795287 41796195 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g02003 10 41795287 41796195 Phco10g02003 10 41795287 41796195 ECH
Phco10g02003 10 41795287 41796195 Phco1g00122 1 906827 907583 PCT