Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01984 ATGAAAGAAAGCGTAGAAAACCCTCTGCACCTAAAGTCTGTGAACCACATCTCCCTCGTATGCACCTCCGTTGTAAAATCCATCAACTTCTATCAGAACGTTCTCGGCTTCTTCCCCATCAGAAGGCCAGGATCATTTGATTTTGACGGGGCATGGCTATTTGGATATGGAATTGGAATCCACTTGCTTCAAGCAGAGGACCCTAACGGCATTCCAAGAAAGAAAGAAATCAATCCAAAAGATAATCACATATCATTCCAGTGTGAAAGCATGGTAGCAGTGGAGAAGAAGCTTGAGGAAATGGAGATAGAGTATGTGCGTGCAACGGTGGAAGAAGGTGGCATTAAAGTGGATCAGTTGTTTTTCCATGACCCAGATGGGTTCATGATTGAGATATGCAATTGTGATAGCCTTCCAGTGATCCCCTTAGCAGGTGACATGGTTAGGTCATGCTCTCGAGTGAACCTTCAGATGCTTCAACACAGACAGATACACCAAATTGTGAAGCAGGACTCAACCAAAATTCAAAATGCTATTGTTTAA 543 0.4328 MKESVENPLHLKSVNHISLVCTSVVKSINFYQNVLGFFPIRRPGSFDFDGAWLFGYGIGIHLLQAEDPNGIPRKKEINPKDNHISFQCESMVAVEKKLEEMEIEYVRATVEEGGIKVDQLFFHDPDGFMIEICNCDSLPVIPLAGDMVRSCSRVNLQMLQHRQIHQIVKQDSTKIQNAIV 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01984 180 Coils Coil 91 111 - -
Phco10g01984 180 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 6 134 IPR029068 -
Phco10g01984 180 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 132 IPR004360 -
Phco10g01984 180 Gene3D - 6 137 IPR029068 -
Phco10g01984 180 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 13 135 IPR037523 -
Phco10g01984 180 CDD VOC_like 14 132 - -
Phco10g01984 180 PANTHER - 5 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01984 Phco-Chr10 41701381 41702153 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01984 10 41701381 41702153 Phco10g01984 10 41701381 41702153 ECH
Phco10g01984 10 41701381 41702153 Phco1g00139 1 1002442 1003713 PCT