Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01960 ATGATGCCGAGGGGAGGACAGTGCTTCGAGAAGCTTCGGCGGTTCGCTCGGACGGTTTTCTTCGTGGCGGCATTGCTGGCGTCGCTACTTGTGACGTCGCTGCCTGTGCTCGTCGCGGTTGTCGACGTGCTTGTCCCTTGCGTTCTCATTTCCAGCTTCACCTGTGTCAAGTGCTACGGCTTCAGGGAGCATTTGCGTCGTTACGCTTTCAAGAGCTCCTTGACGGATATTCCTCTCGTTTCCGTCATACGATCCTTCATCATTATCTGTGTTTATTCCATTTGTGATGGTCCGGCTCTTTCACACGGTCCTTATCTTGGAACTGTGACTCTGTCTTCCTTTATCTCAATTGTCCTCCTATCCGTCAAAGCTTGTGTTTTCTCTGTAAATTCTCAGATTGAAGCGGAAGCTACTATTTCCCCTACAAGACAGAGACTCCATTTAAAGAAGTCATGGGGAATGCCTGTCTTATTTCTCTCGTCAGTTGTGTTTGCTCTTGGCCACACTGTGGTTGCTTACAGAACCAGCTGCAGAGCAAGGAGGAAGCTCATGTTTCATAGAGTTGACCCCGAAGCGGTCCTTTCGTGCAAGAATGTTTTCTCTGGTTATCAGAAGGTCCCTCGATCTCCTGTTCCCTGCGAAGGGAGAACCCCAAAAAGTGACGGTGAAATGAAAAGGAAGCCTATTGGAACAGCTCGTGATGAAGAACTGCCACTCAGATTACTTGCAGATTCAGAGAGCTTATTTATCCCCTGCCAAGGTCTTACTCTCCATTACAAGCTCAGCATGCCTGGTTCACCGCCACTTAACATGTCCTCAACATTTTGCTCCACTTCATCGGTGGCTGGGGGGTTGTCAAAGCTTAATAGGCATTTAACGTGTATCTCTCCAAAAGCCCATCGGCAACTCTACCGGAGCTATAGCAATCAATTCTATGGATCATCTCTACATGCTCCTCTTTTAGATGTTCCAGTAAACTTTCCACATCTTAATGAAGAAATCCCTGTTTTGCATCTAGATGAAATTCGTGAAGATGAGAACACAATTAAATTAGAGTCTTTGTCTTTGGAACAAAATGTTGCGGACATTGGTCAAGTAGGTATTATTTTGATACATGGGTTTGGTGGAGGCGTCTTCTCTTGGCGACATGTAATGGGGCCTCTAGCCCGGCAGAGTAATTGCACAGTTGCTGCATTTGATAGGCCTGGTTGGGGATTGACTTCGAGACTGAGCCAGGAGGACTGGGAGAAAAAAGAATTGCCTAATCCTTACAAACTTGAAAGTCAGGTTGATCTCCTTTTGTCCTTCTGTTCTGAGATTGGATTTTCTTCAGTTGTTATGATTGGTCATGATGACGGAGGGTTGCTTGCTCTGTTGGCTGCACAGAGAGTTCAAACATCAATGAATTCTTTCAACGTTACAGTGAAAGGGGTTGTATTGTTAAATGTTAATTTATCAAGGGAAGTAGTTCCTTCCTTTGCTAAAATCCTTCTGCATACATCACTTGGAAAGAAACATTTGGTTCGTCCCCTACTAAGAACAGAAATCACCCACGTTGTGAATCGGCGTTCATGGTATGATGCTACCAAACTGACAACAGAAGTTTTGACTCTTTATAAGGCTCCGCTATATGTAGAAGGATGGGATGAAGCGCTTCACGAGATTGGTAAATTGTCATCGGAAACCATCCTCTCTACAAAAAATGCAGACTTATTGCTACAAGCTGTAGAAGACATTCCAGTGTTGGTCATAGCCGGTGCTGAAGATTCACTCGTCTCAATGAAATATTGTCAAGCAATGGCCTCCAAGTTTTTAAATTCTAGACTGGTTGCAATATCCGGATGTGGTCATCTACCCCACGAGGAGTGTCCAATGGCGTTGCTTGCGGCTATATCACCCTTTATTAATAAACTTTTCTCTGTATATAACTCGCAAAGCCAATAG 1944 0.448 MMPRGGQCFEKLRRFARTVFFVAALLASLLVTSLPVLVAVVDVLVPCVLISSFTCVKCYGFREHLRRYAFKSSLTDIPLVSVIRSFIIICVYSICDGPALSHGPYLGTVTLSSFISIVLLSVKACVFSVNSQIEAEATISPTRQRLHLKKSWGMPVLFLSSVVFALGHTVVAYRTSCRARRKLMFHRVDPEAVLSCKNVFSGYQKVPRSPVPCEGRTPKSDGEMKRKPIGTARDEELPLRLLADSESLFIPCQGLTLHYKLSMPGSPPLNMSSTFCSTSSVAGGLSKLNRHLTCISPKAHRQLYRSYSNQFYGSSLHAPLLDVPVNFPHLNEEIPVLHLDEIREDENTIKLESLSLEQNVADIGQVGIILIHGFGGGVFSWRHVMGPLARQSNCTVAAFDRPGWGLTSRLSQEDWEKKELPNPYKLESQVDLLLSFCSEIGFSSVVMIGHDDGGLLALLAAQRVQTSMNSFNVTVKGVVLLNVNLSREVVPSFAKILLHTSLGKKHLVRPLLRTEITHVVNRRSWYDATKLTTEVLTLYKAPLYVEGWDEALHEIGKLSSETILSTKNADLLLQAVEDIPVLVIAGAEDSLVSMKYCQAMASKFLNSRLVAISGCGHLPHEECPMALLAAISPFINKLFSVYNSQSQ 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01960 647 Gene3D alpha/beta hydrolase 355 639 IPR029058 -
Phco10g01960 647 SUPERFAMILY alpha/beta-Hydrolases 368 637 IPR029058 -
Phco10g01960 647 Pfam Alpha/beta hydrolase family 368 630 IPR000073 -
Phco10g01960 647 PRINTS Epoxide hydrolase signature 372 390 IPR000639 GO:0003824
Phco10g01960 647 PRINTS Epoxide hydrolase signature 447 460 IPR000639 GO:0003824
Phco10g01960 647 PRINTS Epoxide hydrolase signature 612 634 IPR000639 GO:0003824
Phco10g01960 647 PRINTS Epoxide hydrolase signature 579 595 IPR000639 GO:0003824
Phco10g01960 647 PANTHER HYDROLASE 153 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01960 Phco-Chr10 41547110 41551473 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01960 10 41547110 41551473 Phco10g01960 10 41547110 41551473 ECH
Phco10g01960 10 41547110 41551473 Phco1g00154 1 1080249 1084082 PCT