Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01752 ATGCACCAGATTCTCTCTAAGACTTCATCTGCTATGGCCACTTTTCCTTGTTCCAGGGTGCGAAGTGGATTGTGCGTGTGGCCAAATGTCAGGCAACTTTGCTTTAGAAAAGGCATTCTGTATGGATTTATGCGATTGTTTTCTACTCCATTGAAAACGCTGCGTGGAGCAAGTCGCACGCTGAGGGTGGCTCAATTTTGCAGTGTTGCCAATATGTCTTCCTCGTTGCAGATTGAATTGGTACCTTGCCTGAAGGACAATTATGTGTATCTTTTACATGATGTGGATACGGGTACGGTTGGTGTTGTTGATCCTTCTGAAGCTGTGCCTGTCATAGATGTCCTGAGCAGGAAAAATCGAAATTTGACATACATACTCAACACTCACCATCATCATGATCACACTGGTGGAAATGTAGAATTGAAAGCAAGATATGGGGCAAAGGTGATTGGTTCAGGAACTGACAAGGAAAGGATTCCTGGCATTGATATCCATTTGAATGATGGTGATAAGTGGATGTTTGCTGGCCATGAGGTGCGTGTAATGGACACACCTGGTCACACCCGAGGCCATATAAGCTTCTATTTTCCTGGATCTGGGGCAATTTTTACAGGAGACACTTTGTTCAGCTTATCATGTGGCAAGCTGTTTGAAGGAAGCCCTAAGGAGATGATGTCTTCTCTTAAAAAGATCATGTCCCTGCCAGATGATACAAATATATACTGTGGACACGAGTATACGTTGAGCAATACAAAGTTTGCACTGTCCATCGAACCTGAAAACAAAGAACTTCAATCCTATGCTGCTCATGTAGCTTACCTTCGAAGTAAAGGCTTGCCCACAATTCCCACCACACTGAAGGTGGAAAAGGCTTGTAATCCATTCCTGCGTACATCCAGTGCTGCAATCAGACAATCATTAAATATTGCTACCACAGCAAATGATGCAGAAGCTCTTGCTGTCATCCGGCAAACAAAGGATAATTTTTAG 990 0.4343 MHQILSKTSSAMATFPCSRVRSGLCVWPNVRQLCFRKGILYGFMRLFSTPLKTLRGASRTLRVAQFCSVANMSSSLQIELVPCLKDNYVYLLHDVDTGTVGVVDPSEAVPVIDVLSRKNRNLTYILNTHHHHDHTGGNVELKARYGAKVIGSGTDKERIPGIDIHLNDGDKWMFAGHEVRVMDTPGHTRGHISFYFPGSGAIFTGDTLFSLSCGKLFEGSPKEMMSSLKKIMSLPDDTNIYCGHEYTLSNTKFALSIEPENKELQSYAAHVAYLRSKGLPTIPTTLKVEKACNPFLRTSSAAIRQSLNIATTANDAEALAVIRQTKDNF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01752 329 Gene3D - 76 329 IPR036866 -
Phco10g01752 329 PANTHER BETA LACTAMASE DOMAIN 70 329 - -
Phco10g01752 329 NCBIfam hydroxyacylglutathione hydrolase 79 329 IPR017782 GO:0004416|GO:0019243
Phco10g01752 329 Hamap Hydroxyacylglutathione hydrolase [gloB]. 76 329 IPR017782 GO:0004416|GO:0019243
Phco10g01752 329 SMART Lactamase_B_5a 86 244 IPR001279 -
Phco10g01752 329 SUPERFAMILY Metallo-hydrolase/oxidoreductase 76 329 IPR036866 -
Phco10g01752 329 CDD hydroxyacylglutathione_hydrolase_MBL-fold 81 244 IPR035680 -
Phco10g01752 329 FunFam Hydroxyacylglutathione hydrolase, mitochondrial 76 329 - -
Phco10g01752 329 Pfam Hydroxyacylglutathione hydrolase C-terminus 245 329 IPR032282 -
Phco10g01752 329 Pfam Metallo-beta-lactamase superfamily 89 244 IPR001279 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01752 Phco-Chr10 40054508 40056987 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01752 10 40054508 40056987 Phco10g01752 10 40054508 40056987 ECH
Phco10g01752 10 40054508 40056987 Phco9g00596 9 4325684 4328340 PCT