Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01705 ATGGATCCAGAAAAATCAGTAGAGGATCAATTCTCCAAGCTACATCCTTCCATGCCAGTAAACACCAAAATTGGAATAGTGGGTGGTGGTCCAAGTGGCTTATCAGCTGCTTATGCACTGGTCAGGCTTGGATATAATAATGTCACTGTCTTAGAGAAACATCATTCAGTTGGGGGCATGTGTGAGTCAGTAGAAATTGAAGGAAGAGTTTATGATCTAGGTGGCCAAGTTCTGGCTGCAAGCAGTGCTCCAGTCATCTTTCACTTGGCAAAAGAGACAGGTTCTCCACTAGAAGAAATGGACTCCCACAAGCTTGCTGTTATTGACAGTTCCTCAGGACAATACCAAGATATCAAAGTTGCTGATGATTATGTGTGTGTCATGTCACTTACATTAGCAATCCAAGAAAAGGTGAAGCATTCTGGTCGTTTTGGGGTTCATGCTGTCAGTGAAGTTGCTTCAGACTTAGCTCCAGAATATGTTGAGCAACATGGACTTAAATCTGTCCCTAAATCTGTGGCTTATGGTTACACTGCTTCAGGATATGGGTTTATTCAAGATATGCCTTATGCCTACATTCATGAATTTACCAGAACTTCCATGGCTGGAAAAATTCGACGATTTAAAGGTGGATATACGAGTCTTTGGCAGAGGATTGCTGAATCACTTCCTATAAAACTTCACTGTAACACTGAGGTGTTCACAATCAAGAGGAACTCTGACAGTGTCACCGTTAATGTCAAGTGCTCAAGTGAAAGTGAAACTATGCAATTTGATAAGATCATAATCTCGGGCAATTTTCCACTAAAATATGGAAGAACTTATAGATCAGTGCCTTCAACTAGCTTAGAGTGTGAATCAGAAGTAATGGATGTAAGTGAACTTGAAAAGGATTTGTTCAGCAAAGTTGAAACAAATGACTACTACACAACTGTTTTAAAGATAAAGGGAATGGAAAAAATGCCTGTTGGATTTTATTATTTTAGAGAATACATGGAAGATCCCGGCACAATTGGAAATCCAGTTGCCATGCAGAAGTTTTATGCAGACAGTGATATATTCCTGTTCTGGTCCTATGGCAACTCTGCTGATATTAAGGGACCAACTGTCACTGAGCTTGCAATCAAATCAGTAAAGTCAATGGGGGGAGAAGTTGAGAATTTCATTCTTCAACGTCGTTTTAGGTATTTTCCTCACGTCAGCAGCCAAGATATGAGAAACGGATTCTATGAAAAGTTGGAGTCAGAGCTTCAAGGTTCAAGGAATACTTATTATGTTGGTGGGCTTATGGCGTTTGAGCTTACAGAGAGAAATTCATCTTATGCCATGGCTTTGATCTGCAAGAAATTTGCAAATAGCAGTGATTTGCCAGTGTTTCCTTACACTAAGAGTTTGTTTCCCTTGCAAAGTGAGTTCCAGAAAAAGGAGCCAAAAGAACTAGGTGAATTGCCCGGAGTGCAATTTCCCAATTTGCCAACTTTGAATAGCTATTTAAAGCATTGGGGAACTCATTCAGTGACTCAAAACAGAACTCTTTACACTTGGATAAATGAAGGAGGGACAGTGAGTGGCAAGAGGACATATGGAGAACAACACTTAAATGCTTCATGTATTGCACATAAGCTCTTAACGAGTGAAAAGACAGTGATCAAACCTGGTGACAGGGTTCTCCTAGTCTATGTTCCTGGTCTAGATTTCATTGATGCCTTCTTTGGATGTCTAAGAGCTAAAGTTTTACCGGTCCCAGTTCTTCCCCCGGACCCCATGCAAAGAGGTGGACAAGCACTTCTAAAAATTGAGAACATTGCCAAGTCATGTGGCATAGTGGCGATTTTATCAACAGTGGCTTATCATTCAGCAGTACGTGCAGGTCGGGTGAAAAGTTTGATCTCATTAACTGGAAAAATTGGGAAATCCGCAGCTCAGTGGCCTAAACTTCCTTGGCTGCACACTGATTCTTGGGTCAATAATAACTCGAGAAATTTGGCTTTGGAAGATGTAGATGATCAATGTGAATCCAAGCCTAGTGATATATGTTTCTTGCAGTTTACCTCAGGTTCAACTGGAGATGCTAAAGGAGTCATGATAACACATGGAGGGCTCATTCACAATGTAAAGCTGATGAAAAGTGTATACAAGAGCACCTCAAGGACAATGCTAGTGAGTTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGAGGACTTTTTACAGCTCTTGTTAGTGGTGGATCTGCTGTGCTTTTTTCACCGATTACATTTATTAAAAAACCACTCTTATGGCTTGAAACCATAAGCAAGTATCAAGCAACTCACAGTGCAGGCCCCAACTTTGCTTTTGAGTTGGTGGTTCGAAGGTTAGAGTCTGACAAGGACAAGCTTCAGAATTTAAACCTTTCATCCATGGTTTTTCTCATGGTTGCCGCTGAGCCAGTGAGACTGAAGACCATGAAAAGGTTTCTTGATTTAACCGCTTCTTTTGGCTTATCTCAGAAGGTGATGGCTCCAGGATATGGCTTAGCAGAAAATTGTGTGTTTGTCAGTTGTGCATTTGGTGAAGGGTGTCCTATTCTTGTTGACTGGCAGGGAAGAGTTTCTTGTGGATATATTCACCCTGGTGATGCAGATATTGACATTAGAATAGTTGATCCAGAGAATTGTGAAGAGCTTCGAGAAGATGGAAAGGAAGGAGAAATATGGATAAGTAGTCCAAGTGCTGGAATAGGATACTGGGGAAAGGAAGAACTGAGTCAGAAAACTTTTAGAAATGAGCTTCAGAACCATCCTGGACGAAACTACACAAGAACTGGAGACTTGGGAAGAATAATTGATGGGAAGCTATTCATCACCGGGAGAATCAAGGATCTTATCATTGTGGCTGGAAGAAACATCTACTCAGCAGATGTTGAGAAAACAGTGGAGAGTTCATCTGAATTTCTTCGTCCAGGGTGTTGTGCAGTCATTGGTGTCCCTGAGGAGGTTTTATCAGCAAAGGGGATTACCCTGCCAGATGGATCTGACCAAGTTGGCTTGGTTGTGGTTGCTGAAGTGAGGGATGCTAAAGCGGTGAGCAAAGATGTGATTGAGCATATCCAGACTCGTGTGGCAGAAGAACATGGAGTCAGTGTTGCTTCTGTCAAGTTGATCAAGCCAAGAACCATCAGCAAAACAACATCAGGAAAAATCAAGAGATTTGAATGTCTCAAACAGTTTGCAGATGAAACACTGAATTTGGTGCCTCAACCTATTCCGACAAGGAAATCACTGTTAAGATCGTTTACTACAGGAACATGCACAGAAGGAAGAACACCCCGGGCCCACCTGGTGAGAAGTAGTAATCCTCTACCTATTCCAAGAAGTAACAAGGAAATTGTGGAACACTTGAAAAGGCTTATTTCTGAGCACTCAGGAATCCCAATCAAAGATATCTCAGTCGCAGAGAACATGTCAGCCTATGGAATTGATTCAATTGGAGTGGTTAAAGCAACTCAAAAACTCTCAGATTTCCTGGGTGTGCCAGTTGCAGCTATAGATGTCTTCACTGCATCATGCATTCAAGAATTGGCTAACTTCTCCGAGAATCTTATGTTAAAGTCTCAACCTCAACTTAAGAGCAATTCATCCCATGCTCCACTTGCTGACATTGACACTACTGAAATGGTTGTGGATGTGTCCAAGTCTCGCCAATGGGGTATCCGTTTACTCCAACTCCTAGCACTTATTTATGTTTCCATCATGCTGTTTTCTCCTGCTTATCTATCCATCACTGCTTTTCAAAGTTTCATACCAAATGCCAGTGAATCGGTATATGGAATGCCTTGGTCAAACTATTTGCTTTCCTTGACTTTGGCACCCCTTTCTTGGATCCTTTGCATGGTTTCTACTTGCATTTGCATTTCACTTTTGGGGAATTCTTTCTTGAGGCCAAACTATGCCCTGACACCCGAAATATCCATCTATTCAATGGATTTTGTCAAGTGGTGGGCGCTCTATAAAACTCAGGAAATTTCTTCGAAAGTTTTGGCAACACACCTCAGAGGAACAGTGTTTCTGAAATACTGGTTTGAGATGCTTGGTGCAAGAATTGGATCCTTAGTTTTACTGGACACAGTTGATATCACAGACCCGTCTCTGGTTTCAATTGGAGATGAAGTTGCCATTGCTGAAGGGGTTTTGGTTCAAAGTCATGAGGTGAAGAATGGAATTCTAAGTCTCCTCCCTATTAGGATAGGTAGAAATTCTTCAATTGGGCCTTATTCTACTATTCAAAAAGGAAGTGTGATTAAAGAAGGATCTGAAGTAGAACCCCTGCAAAAGGTTGAAGGAGGCCAACATGTGCCCAAGCCTGCTAAGCTTAATAACGTTAAAGAGAATGCAGTGTTGCTTGTTACAACCAGCAAAACCCAGTCTAATGCCATGTACCATTTCCTGGGGATCTATCTTACTGGCTTTCTCAGCTCCCTTGCTGCAGCCATTGCTTACATCCTGTACATATGGTTCTTCCGGATACCTGCATCATTCCAACACTTTTCATTTCTTTGCATATGTGGGGCATTCCATTGGATCCCATTTACCATTGTTGCATATGCCACCATGTTTTCTGATATCCCATCAAATGCCATTGCCTTTACCATTTCATTTACCTGCGCGTACTTGCTCCATGGTCTCATACTCACCTCTCTCACCTGCGCCTTGACCCGTTTGCTAAAATTCAGTCAAAACCAAACCCTTTTTAAAACCTGGCTTAGAAATCAATTGACCATTTCCTGCCACCAAAGATTTGCCAAGCTTCTCTCAGGAACAGAAGCCTTCTGCATATATTTACGCCTTTTGGGTGCAAAAATTGGCAAGCACTGCTCGATTAGAGCCATCAACCCAGTTTCAAACCCCGAGTTAATGTCAATAGGTGATGGAGTCCATCTTGGTGATTTTAGCAAGATAATCACTGGTTTCCACTATTCAAACGGATATGCTTGTGGAAAAATAGAGGTTCAGGATAATTCAGTTGTGGGGAGTCAAAGCCTAATCCTCCCAGGTTCTGTTGTAGAAAAGAATGTCATTCTGGGTGCTCTTTCAGTTGCTCCAATGAATTCTATACTCCATGAGGGTAGCGTGTATATTGGATCCCAAACCCGAGTTGCAATCAGGAACTCTTCGAACTCTTTAGATGAACGGATAGAGGAGATGGACATGGAATACAAGAAAGTAGTTGCAAATATGGCTGCAAATTTAGCTGTAACAACTATCAATGTCAAAGCAAGATACTTCCACCGCATTGGTGTTAGTGGAAAGGGGCACTTGAAAATCTACGACAAACTTGAGGGCATTCCACTGCACAAGGTTTTCCAACCTGGTAAAAGCTACCCCGTCATGGTAAGACACAGTAATAGCTTGAGTGCTGACGATGATGCTAGGATCGATGCACGTGGTGCATCTTTGAGGATTCTTTCTGATGCACCTGATTCTGACCATGTTCCCCTCATTGACCTGACACTAAAAACTGGCAATGCGTTTTATGCTCGTACTCTTGCTGATTTTGCAAGCTGGCTTGTGTGTGGCCTTGCTGCGAGAGAGGAACTTGTCAAGCGTACCCCACATGTTCGTGAAGCAGTGTGGAATTCACTTAGACATGCTCACTCATATGCTGAACTGCATTACTACTCAAACTATTGCAGGCTCATGCGCTGCACCGATGGACAAGAAATGTACGTGAAGTTTAAGCTAAGGCCTATTGACACAAGCATTGGTGAGGACACGGGTAAGGTTAAACCAACTGGAATTCTTCCACCGGAAACAGGTGCAATTCCAAGGGATGAAAATGATACACGTCCCTTACTTTTCCTTGCTGAAGACTTTAAACGGCGCGTGAGTTCCCCAGGTGGAGTTCGCTATGTCTTCCAAGTGCAACTTCGAGCAGTGCCAGAAGATGAAGCCGCACGTGACATTGCACTGGACTGCACCAAACCATGGAATGAAAGTGAGTCCCCTTGCATTGATGTTGGAGAGATAAACATCACTGAGAATCTCTCTAGGGAAGAATCAGACAAGCTTGAATTTAACCCCTATATCAAAAGCCATGAGTTGGACGTGCTCCCTGCCACTTCCAACACCCAAAGTGCCTCAATCGATCATGGCCGTTCATTGATCTACGAGATTTGCCAGCACGTGCGTAATGGACAGCCACTCCCAGTCTCTTGGAGAAACCTCGTAGAGCAATCTAACGTCAAGGTAGACTTGTCCTGCTGTCCTATCGCAGCATCAGTAGCAACATCAAAGCCCAAAAAGGAGACGAAATTGGTGACAACCTTAACCTTGACAAGAACCTGGTACCAGACATTCTCCGCGGTTTTCACTCAACCGTTGCTACAAACAGTTTTGCCTTACACGGTGGTGGGTTTGTCTGTTTTTGCCCCTCTGAACTTTGTAATGAATATGAAGAACGCTGAGAAACTCTCAGTGCAATGGCTGTCTGCTTTGTTTTGGATTCTCTCGGGTGTTATGGGTGCACTGGCATGTGTTGTGGCCAAATGGATTCTGGTTGGAAGGAAGAGAGAGGGTGAGACAGTAGCCTTGTGGAGCAAAATGGTGATGATGGATAGCACGTGGCAAGCCATTAGAACGCTGGTTGGGGACTACTTCATGGACATAGCAAGTGGGTCGTTTTTGTTTGTGATGTGGATGAGGTTGATGGGTTCAGAAATAGACATGGATGGTGATGCTTACGTTGACAGCATGGGAGCTTTGTTGAACCCCGAAATGGTGAAGATTGAGAGAGGTGGTTGTGTGGGAAGAGAAGCATTGCTATTTGGACACATATATGAAGGTGATGAAGGTGGAATGGTGAAGTTTGGTGGAATCAAAATTGGTGAAGATGGGTTTGTGGGAAGTAGAGCTGTGATCATGCCTGGTGTTCATGTGGAGAATGAAGCCAATCTTTCTGCCCTTTCTCTTGCCATGAAAGGAGAAATAGTTAGGTCAAGATAA 6984 0.4293 MDPEKSVEDQFSKLHPSMPVNTKIGIVGGGPSGLSAAYALVRLGYNNVTVLEKHHSVGGMCESVEIEGRVYDLGGQVLAASSAPVIFHLAKETGSPLEEMDSHKLAVIDSSSGQYQDIKVADDYVCVMSLTLAIQEKVKHSGRFGVHAVSEVASDLAPEYVEQHGLKSVPKSVAYGYTASGYGFIQDMPYAYIHEFTRTSMAGKIRRFKGGYTSLWQRIAESLPIKLHCNTEVFTIKRNSDSVTVNVKCSSESETMQFDKIIISGNFPLKYGRTYRSVPSTSLECESEVMDVSELEKDLFSKVETNDYYTTVLKIKGMEKMPVGFYYFREYMEDPGTIGNPVAMQKFYADSDIFLFWSYGNSADIKGPTVTELAIKSVKSMGGEVENFILQRRFRYFPHVSSQDMRNGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMALICKKFANSSDLPVFPYTKSLFPLQSEFQKKEPKELGELPGVQFPNLPTLNSYLKHWGTHSVTQNRTLYTWINEGGTVSGKRTYGEQHLNASCIAHKLLTSEKTVIKPGDRVLLVYVPGLDFIDAFFGCLRAKVLPVPVLPPDPMQRGGQALLKIENIAKSCGIVAILSTVAYHSAVRAGRVKSLISLTGKIGKSAAQWPKLPWLHTDSWVNNNSRNLALEDVDDQCESKPSDICFLQFTSGSTGDAKGVMITHGGLIHNVKLMKSVYKSTSRTMLVSWLPQYHDMGLIGGLFTALVSGGSAVLFSPITFIKKPLLWLETISKYQATHSAGPNFAFELVVRRLESDKDKLQNLNLSSMVFLMVAAEPVRLKTMKRFLDLTASFGLSQKVMAPGYGLAENCVFVSCAFGEGCPILVDWQGRVSCGYIHPGDADIDIRIVDPENCEELREDGKEGEIWISSPSAGIGYWGKEELSQKTFRNELQNHPGRNYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSADVEKTVESSSEFLRPGCCAVIGVPEEVLSAKGITLPDGSDQVGLVVVAEVRDAKAVSKDVIEHIQTRVAEEHGVSVASVKLIKPRTISKTTSGKIKRFECLKQFADETLNLVPQPIPTRKSLLRSFTTGTCTEGRTPRAHLVRSSNPLPIPRSNKEIVEHLKRLISEHSGIPIKDISVAENMSAYGIDSIGVVKATQKLSDFLGVPVAAIDVFTASCIQELANFSENLMLKSQPQLKSNSSHAPLADIDTTEMVVDVSKSRQWGIRLLQLLALIYVSIMLFSPAYLSITAFQSFIPNASESVYGMPWSNYLLSLTLAPLSWILCMVSTCICISLLGNSFLRPNYALTPEISIYSMDFVKWWALYKTQEISSKVLATHLRGTVFLKYWFEMLGARIGSLVLLDTVDITDPSLVSIGDEVAIAEGVLVQSHEVKNGILSLLPIRIGRNSSIGPYSTIQKGSVIKEGSEVEPLQKVEGGQHVPKPAKLNNVKENAVLLVTTSKTQSNAMYHFLGIYLTGFLSSLAAAIAYILYIWFFRIPASFQHFSFLCICGAFHWIPFTIVAYATMFSDIPSNAIAFTISFTCAYLLHGLILTSLTCALTRLLKFSQNQTLFKTWLRNQLTISCHQRFAKLLSGTEAFCIYLRLLGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSKIITGFHYSNGYACGKIEVQDNSVVGSQSLILPGSVVEKNVILGALSVAPMNSILHEGSVYIGSQTRVAIRNSSNSLDERIEEMDMEYKKVVANMAANLAVTTINVKARYFHRIGVSGKGHLKIYDKLEGIPLHKVFQPGKSYPVMVRHSNSLSADDDARIDARGASLRILSDAPDSDHVPLIDLTLKTGNAFYARTLADFASWLVCGLAAREELVKRTPHVREAVWNSLRHAHSYAELHYYSNYCRLMRCTDGQEMYVKFKLRPIDTSIGEDTGKVKPTGILPPETGAIPRDENDTRPLLFLAEDFKRRVSSPGGVRYVFQVQLRAVPEDEAARDIALDCTKPWNESESPCIDVGEINITENLSREESDKLEFNPYIKSHELDVLPATSNTQSASIDHGRSLIYEICQHVRNGQPLPVSWRNLVEQSNVKVDLSCCPIAASVATSKPKKETKLVTTLTLTRTWYQTFSAVFTQPLLQTVLPYTVVGLSVFAPLNFVMNMKNAEKLSVQWLSALFWILSGVMGALACVVAKWILVGRKREGETVALWSKMVMMDSTWQAIRTLVGDYFMDIASGSFLFVMWMRLMGSEIDMDGDAYVDSMGALLNPEMVKIERGGCVGREALLFGHIYEGDEGGMVKFGGIKIGEDGFVGSRAVIMPGVHVENEANLSALSLAMKGEIVRSR 2327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01705 2327 Gene3D Hexapeptide repeat proteins 2190 2321 - -
Phco10g01705 2327 SUPERFAMILY Heme-dependent catalase-like 1746 2060 IPR020835 GO:0020037
Phco10g01705 2327 Gene3D - 23 446 IPR036188 -
Phco10g01705 2327 SUPERFAMILY FAD/NAD(P)-binding domain 18 271 IPR036188 -
Phco10g01705 2327 SUPERFAMILY Trimeric LpxA-like enzymes 1346 1448 IPR011004 -
Phco10g01705 2327 Gene3D - 94 202 - -
Phco10g01705 2327 Gene3D Hexapeptide repeat proteins 1359 1472 - -
Phco10g01705 2327 ProSitePatterns Putative AMP-binding domain signature. 681 692 IPR020845 -
Phco10g01705 2327 Gene3D Catalase core domain 1714 2067 - -
Phco10g01705 2327 PRINTS Adrenodoxin reductase family signature 23 45 - -
Phco10g01705 2327 PRINTS Adrenodoxin reductase family signature 47 60 - -
Phco10g01705 2327 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 132 2077 - -
Phco10g01705 2327 Pfam Flavin containing amine oxidoreductase 32 265 IPR002937 GO:0016491
Phco10g01705 2327 ProSiteProfiles catalase family profile. 1685 2327 IPR018028 GO:0004096|GO:0006979|GO:0020037
Phco10g01705 2327 Gene3D - 482 953 IPR042099 -
Phco10g01705 2327 Gene3D - 303 396 - -
Phco10g01705 2327 SUPERFAMILY ACP-like 1121 1196 IPR036736 -
Phco10g01705 2327 Gene3D Hexapeptide repeat proteins 1579 1713 - -
Phco10g01705 2327 Gene3D - 1115 1195 IPR036736 -
Phco10g01705 2327 SUPERFAMILY Acetyl-CoA synthetase-like 493 1078 - -
Phco10g01705 2327 SUPERFAMILY Trimeric LpxA-like enzymes 2173 2320 IPR011004 -
Phco10g01705 2327 Gene3D - 954 1083 IPR045851 -
Phco10g01705 2327 ProSitePatterns Phosphopantetheine attachment site. 1151 1166 IPR006162 -
Phco10g01705 2327 Pfam Phosphopantetheine attachment site 1128 1191 IPR009081 -
Phco10g01705 2327 ProSiteProfiles Carrier protein (CP) domain profile. 1119 1196 IPR009081 -
Phco10g01705 2327 CDD FAAL 505 1073 IPR040097 GO:0008610
Phco10g01705 2327 Pfam AMP-binding enzyme 523 959 IPR000873 -
Phco10g01705 2327 SUPERFAMILY Trimeric LpxA-like enzymes 1602 1714 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01705 Phco-Chr10 39525519 39533189 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01705 10 39525519 39533189 Phco10g01705 10 39525519 39533189 ECH
Phco10g01705 10 39525519 39533189 Phco9g00635 9 4676495 4677897 PCT