Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01693 ATGGGTGCTGTTAGCTTTATAACGATGATAGTGGTGTTATTCATGGCACTCAGCTCCGGCGTGCGCTCGTGTCCTCCATCGGACAGGGCCGCGCTGCTGGCATTCAAGGCGGCGCTACACGAACCCTACCTCGGAATCTTCAACTCGTGGACCGGCGCCGACTGCTGCCACAACTGGTACGGCGTGAGCTGCGACCAGGAGACCCGCCGCGTCGCCGACATCAGCCTCCGCGGCGAGTCGGAGGAGCCGATCTTCGAGCGAGCTCACCGGACTGGCTACATGACCGGCTACATCTCGCCGGCGATCTGCAAGCTCGCGCGTCTCTCCAGCATCACCATCGCAGACTGGAAGGGAATCTCCGGGGAGATCCCTCGCTGCATCACGGCCCTACCGTTCCTCCGCATCGTCGACCTCATCGGTAACCGCATCTCCGGCAGCATCCCCGCGGACATCGGCAGGCTCCACCGCCTCACGGTGCTAAACATCGCCGACAACCGCATCTCCGGCACGATCCCGGCGTCGCTCGCGAACCTCACGAGTCTCATGCACTTGGATCTCCGTAACAACCTCCTCTCCGGGCCCATTCCGAGGAACTTCGGTTCTCTCCGAATGCTGAGCAGGGCCTTGCTCAGTGGAAACCGCCTTAGTGGGCCCATCCCGGGCTCCGTTTCACTCATTTACCGTCTGGCGGATCTGGATCTGTCTCGGAACCAACTTTCTGGGCTCATTCCCGAGTCACTGGGTAAAATGGCGGTGTTGTCTACGCTGAATTTGGACTTGAATAAACTCTCTGGGCCCATTCCTGTGAGCCTGTTTAGTTCGGGTATCAGTGACCTAAACTTGAGCCGAAACGCGTTGCAGGGTAACATACCCGACGCTTTTGGTCCGAGGTCTTATTTCACTGCTCTTGATCTGTCCTACAATAATCTTAAAGGAACCATACCCAAATCCCTATCCTCTGCCTCCTACATTGGACACTTGGATTTAAGTCACAACCATCTCTGTGGCAAGATTCCCCTTGGATCTCCCTTCGATCATCTCGAAGCTTCTTCCTTTGTCTTCAACGATTGTCTCTGCGGAAAGCCCCTCAAACCTTGCTAA 1101 0.5686 MGAVSFITMIVVLFMALSSGVRSCPPSDRAALLAFKAALHEPYLGIFNSWTGADCCHNWYGVSCDQETRRVADISLRGESEEPIFERAHRTGYMTGYISPAICKLARLSSITIADWKGISGEIPRCITALPFLRIVDLIGNRISGSIPADIGRLHRLTVLNIADNRISGTIPASLANLTSLMHLDLRNNLLSGPIPRNFGSLRMLSRALLSGNRLSGPIPGSVSLIYRLADLDLSRNQLSGLIPESLGKMAVLSTLNLDLNKLSGPIPVSLFSSGISDLNLSRNALQGNIPDAFGPRSYFTALDLSYNNLKGTIPKSLSSASYIGHLDLSHNHLCGKIPLGSPFDHLEASSFVFNDCLCGKPLKPC 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01693 366 Gene3D Ribonuclease Inhibitor 91 366 IPR032675 -
Phco10g01693 366 Gene3D Ribonuclease Inhibitor 22 90 IPR032675 -
Phco10g01693 366 Pfam Leucine rich repeat 156 215 IPR001611 GO:0005515
Phco10g01693 366 Pfam Leucine rich repeat 277 334 IPR001611 GO:0005515
Phco10g01693 366 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 99 195 - -
Phco10g01693 366 FunFam Leucine-rich repeat family protein 22 90 - -
Phco10g01693 366 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Phco10g01693 366 SUPERFAMILY L domain-like 23 365 - -
Phco10g01693 366 FunFam Calmodulin-binding receptor kinase CaMRLK 203 316 - -
Phco10g01693 366 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 7 273 - -
Phco10g01693 366 Pfam Leucine Rich Repeat 232 249 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01693 Phco-Chr10 39452536 39453636 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01693 10 39452536 39453636 Phco10g01693 10 39452536 39453636 ECH
Phco10g01693 10 39452536 39453636 Phco9g00646 9 4760820 4761914 PCT