Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01677 ATGGAGTACTCTGCAGAATCTTTGGGAAGAGATCTTAAGAGCGTGAGGAAGTACTTCGGGAGTGGAAAAACAAAGGAAGAATCATGGAGAGAATCACAGCTTAAAGGGTTGCACAATTTTCTAGTTGAAAGAGAGGAAGAAATTCTGAGAGCCCTCAAGCAAGACTTGGGAAAGCATTATGTGGAGGCCTTCAGAGATGAGGTAGGAACGTTGGTAAAGACCTTAAACATCGCTAAAAAGAATTTGAAGAAATGGATGGCGGGGGAAGAGGCTAAATTGCCAAAAATAGCACTGCTTTCAAGTGCTGAGATAGTTCCTGAGCCACTTGGTCTTGTTCTCATAATCTCATCATGGAACTTCCCCTTTGGACTGTCCTTGGAGCCACTAATAGGAGCAGTAGCTGCTGGAAACACTGCAGTTCTAAAGCCTTCAGAGATGTCCCCCACTTGCTCTTCTCTTTTAGCCACTGTCCTCCCAACGTACTTGGACAACAATGCCATTAAGGTCATAGAAGGTGGACCAGAAGTGGGGGAGCTACTCTTAGAGCAACGATGGGACAAGATTTTCTTCACAGGAAGTGCAAGGGTGGGAAGGATTGTTATGTCTGCTGCATCTGTGCATCTTACTCCAGTGACTTTGGAGCTGGGTGGAAAATGTCCAGCACTGGTTGATTCTCTTACTTCTTCTTGGGACAGAGAGGTGGCTGTGAAACGAGTTTTGGTGGCAAAATTCGGGGCTTGTGCAGGACAAGCATGCATAGCAATCGATTATGTCCTTGTAGAGAAGAGTTTCAGTTCTACATTGGTGACATTAATGAAGGCTTGGATTAAGAAAATGTTTGGAGAAAATCCGAAACAGTCCAATACTGTTGCAAGGATAGTTAACGACAAACATTTCATGAGACTCAAGAATCTTCTCACTGATCCAAGGGTCAAAGAGTCGGTGGTTTATGGTGGTTCTATGAACGACAATGACTTATTTATTGAACCCACGATATTGCTGGATCCCCCACTTGATTCAGCAATCATGGCTGATGAAATCTTTGGCCCAGTTCTTCCAATCATCACTCTGGAGAAGATTGAAGACAGTGTCGAGTTCATAAGCTCAAGGCCTAAACCATTAGCAATTTATGCCTTCACGAAAAACAAAACTCTGCATAGAAGACTGGTATCTGAAACATCATCCGGAAGTCTTGTTTTTAACGATGCAATTCTACAGTACGTTGCGGATACCCTGCCATTTGGAGGAGTTGGTGAATGTGGGTTTGGCAAGTATCATGGAAAGTTCTCCTTTGACGCGTTCAGTCACCACAAGGTCGTGGTCAGAAGAAGTTACTTGACTGATTTCTGGTACAGGTTTCCTCCATGGACTCTTAACAAGCTCCAACTACTTGAGGTGTCTTACAACTTGGATTATCTTGGAATACTTCTAGTTCTGCTTGGCTTAAAGAAGTCAAAACGGTCCTTATTTTAG 1473 0.4352 MEYSAESLGRDLKSVRKYFGSGKTKEESWRESQLKGLHNFLVEREEEILRALKQDLGKHYVEAFRDEVGTLVKTLNIAKKNLKKWMAGEEAKLPKIALLSSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNTAVLKPSEMSPTCSSLLATVLPTYLDNNAIKVIEGGPEVGELLLEQRWDKIFFTGSARVGRIVMSAASVHLTPVTLELGGKCPALVDSLTSSWDREVAVKRVLVAKFGACAGQACIAIDYVLVEKSFSSTLVTLMKAWIKKMFGENPKQSNTVARIVNDKHFMRLKNLLTDPRVKESVVYGGSMNDNDLFIEPTILLDPPLDSAIMADEIFGPVLPIITLEKIEDSVEFISSRPKPLAIYAFTKNKTLHRRLVSETSSGSLVFNDAILQYVADTLPFGGVGECGFGKYHGKFSFDAFSHHKVVVRRSYLTDFWYRFPPWTLNKLQLLEVSYNLDYLGILLVLLGLKKSKRSLF 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01677 490 PIRSF ALDH 2 476 IPR012394 GO:0006081
Phco10g01677 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 420 IPR016163 GO:0016620
Phco10g01677 490 FunFam Aldehyde dehydrogenase 217 420 - -
Phco10g01677 490 FunFam Aldehyde dehydrogenase 16 220 - -
Phco10g01677 490 PANTHER ALDEHYDE DEHYDROGENASE 6 475 IPR012394 GO:0006081
Phco10g01677 490 Pfam Aldehyde dehydrogenase family 26 440 IPR015590 GO:0016491
Phco10g01677 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 438 IPR016162 GO:0016491
Phco10g01677 490 SUPERFAMILY ALDH-like 13 457 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01677 Phco-Chr10 39324173 39327091 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01677 10 39324173 39327091 Phco10g01677 10 39324173 39327091 ECH
Phco10g01677 10 39324173 39327091 Phco9g00669 9 4970134 4973622 PCT