Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01619 ATGACTGAGAATAAAGCATACAGAAATCTGCTGATTGAATTTCATCCTAAAAGTTTTGTTAAGAGAAACCATGAATATCTCATTTTGCTGCTCCGCGGCCGCTTTGGAAGCAGTGTTGTGGGTCGCATCACATTTTTTTTACTTAAAGTTGCTGCTTTAGAGATCATAAGGAGGGTCTCCAAGAACAGATGTCCATGTGTATGGCGAGGCCTTCAGTCTCTACAAATCCTGTGTTATCCACCTTTTAAATGGATTCAGAGGTGGGCACCCTTCAAGGGTTTGGTTGACAACATGCAGGTCCTATCAAGACCTTTGCTAGCCCTTTCAATTGCAACATTGTTTTCTGAAAAGTCAATTGCAATGTTGATTTCTGATAAATCAAAATGTAGTGATAGAAAGTCAGATTGCAGTTCAGAAGATGCAGCTGTATACTCTGAATTATCTCCTTTACAGGTTGATTTGAATATAAGCCAGGGGTCGACAAATCCTAAAAATTTAGAATCTGATAAGTGGTTGACTCAACTCAATCAGGAGCTTGAAAATCAAGGACTTAGTTTACCAGAAAGAATCAATGATGACGAGCTTAGGAGATTTTATGCAGCTTCTAATAATGATTTTTCATGCTTCCTTACCTCAATAAAGAAGACCATACGATGGCGAGAGACTTACAGAATTCTTTCTGAGGAAGAACAGAAAAGGTGGACAAAAGTGGTGTTTTGGCATGGGTGTGACGTGGAGCACAGACCTTGCCTAATTGTAAGGCTCGGATCAGCCTGCAATACTTTGGCATCGGAAGATAGACCTCGATTTGCTCAGGCAGTCATATCACAGGTGGAATATGGAGTCTTGCATTTGGTTGATGCAGACAACCCTCAAATTACAGTGTTGGTCGACTGTGATGGGTTATCTCCAGAGAGAATTCCCATGCAAATAATGAGATCTTGTTCTTCCCTTCTGCAAGACCACTTTCCCAATCGTCTTGGTTGCATGTTTGTCATACAACTGCCAGCCAGTGTTCATGCTGTTGCCCAGTCTTTTATTCAGGATCTGAAGCCTGCTACTAGAAACAAGTTGAAAATAGAAGGCGAAATGTATCAGAAAGTTCTTTCTGATTATCTGTCGACACTGCCTTCATATCTTGGAGGCTGCTGCACTTGCATGAATTGCTCCACCATTGGCCAACAGGATATGCTGCAACCTTATGCAACTGGAACCAGCAGGAGAGACAGGGTGGAGGACACCAGTGACAGTGACAATGAGGTTCCTCCAATGTTGCATCCTTCCAATGAATTAGAAGGCCGCTTTTATGGTCAATATGACCATTTGTTTAGAGCTGCTATCGTAGGTATTCTTATATTTTGGGCTTTTGTAGCCCTTGGTTCTGTAGTATTTGATTCCAGTGATCTTCACCTGCCCTGA 1419 0.4186 MTENKAYRNLLIEFHPKSFVKRNHEYLILLLRGRFGSSVVGRITFFLLKVAALEIIRRVSKNRCPCVWRGLQSLQILCYPPFKWIQRWAPFKGLVDNMQVLSRPLLALSIATLFSEKSIAMLISDKSKCSDRKSDCSSEDAAVYSELSPLQVDLNISQGSTNPKNLESDKWLTQLNQELENQGLSLPERINDDELRRFYAASNNDFSCFLTSIKKTIRWRETYRILSEEEQKRWTKVVFWHGCDVEHRPCLIVRLGSACNTLASEDRPRFAQAVISQVEYGVLHLVDADNPQITVLVDCDGLSPERIPMQIMRSCSSLLQDHFPNRLGCMFVIQLPASVHAVAQSFIQDLKPATRNKLKIEGEMYQKVLSDYLSTLPSYLGGCCTCMNCSTIGQQDMLQPYATGTSRRDRVEDTSDSDNEVPPMLHPSNELEGRFYGQYDHLFRAAIVGILIFWAFVALGSVVFDSSDLHLP 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01619 472 SMART sec14_4 232 385 IPR001251 -
Phco10g01619 472 MobiDBLite consensus disorder prediction 403 423 - -
Phco10g01619 472 Pfam CRAL/TRIO domain 235 382 IPR001251 -
Phco10g01619 472 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 4 460 - -
Phco10g01619 472 CDD SEC14 228 382 IPR001251 -
Phco10g01619 472 Gene3D - 158 417 IPR036865 -
Phco10g01619 472 SUPERFAMILY CRAL/TRIO domain 235 387 IPR036865 -
Phco10g01619 472 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 226 388 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01619 Phco-Chr10 38928454 38931413 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01619 10 38928454 38931413 Phco10g01619 10 38928454 38931413 ECH
Phco10g01619 10 38928454 38931413 Phco9g00742 9 5510079 5516053 PCT