Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01603 ATGCCGATTTCTAGAATTGCCGTTGGAAATTCTTCGGAGTTGAGCCAGGTGGACGTGCTTAAGGCTGCTCTTGCTGAGTTCATCTCAATGCTCATTTTTGTTTTTGCCGGAGAAGGCTCTGGCATGGCTTTTAATAAGCTCACAAACAATGGTTCAACAACTCCAGCAGGTTTAGTGGCAGCGTCACTGTCACATGCATTTGCACTTTTTGTTGCTGTCTCAGTTGGTGCAAACATTTCTGGTGGCCATGTAAACCCTGCTGTCACTTTTGGTGCCTTTATTGGAGGCCACATTACTCTCTTCAGAAGCATTTTGTACTGGATTGCTCAGTTACTTGGCTCTGTGGTTGCTTGCTTGCTCCTTAAATTTGCCACTGGTGGAATGGAAACATCTGCATTTGCACTTTCTTCTGGTGTAGGAGCAGGGAACGCTCTAGTGTTTGAGATTGTGATGACTTTTGGTTTGGTTTACACGGTGTACGCAACTGCAGTGGATCCAAAGAAGGGTGACATCGGCATAATTGCTCCAATTGCAATTGGTTTCATAGTTGGTGCTAACATCTTAGCTGGTGGTGCATTTGATGGTGCATCCATGAACCCTGCCGTATCTTTTGGGCCTGCTGTTGTGAGTTGGACTTGGGCTAACCATTGGGTTTATTGGGTCGGCCCATTCGCTGGTGCTGCCATTGCTGCTGTTGTCTACGAGATTTTGTTCATCAACCCAAACACTCATGAACAGCTCCCCACCACTGATTACTAG 759 0.4638 MPISRIAVGNSSELSQVDVLKAALAEFISMLIFVFAGEGSGMAFNKLTNNGSTTPAGLVAASLSHAFALFVAVSVGANISGGHVNPAVTFGAFIGGHITLFRSILYWIAQLLGSVVACLLLKFATGGMETSAFALSSGVGAGNALVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWANHWVYWVGPFAGAAIAAVVYEILFINPNTHEQLPTTDY 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01603 252 FunFam Probable aquaporin TIP1-1 4 252 - -
Phco10g01603 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Phco10g01603 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Phco10g01603 252 PANTHER AQUAPORIN-8 6 247 IPR034294 -
Phco10g01603 252 Pfam Major intrinsic protein 13 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco10g01603 252 SUPERFAMILY Aquaporin-like 14 244 IPR023271 -
Phco10g01603 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco10g01603 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco10g01603 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco10g01603 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco10g01603 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco10g01603 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Phco10g01603 252 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01603 Phco-Chr10 38801380 38802471 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01603 10 38801380 38802471 Phco9g00758 9 5617361 5618509 PCT