Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01494 ATGGAGAAGCTTGCTACCACGATTTTGATTTGCTGCTCACTGTTATTCCTGTCTATATCAGTGATATCTCGAGAAGTTGATGATGAGAGTGAGTTTAGTTACGAGGAAGAGAGCGAGAATGGACCGTCTCAATGGGGAAACATACACCCTGAATGGAGTTTGTGCAACAATGGATCCATGCAGTCACCAATTGATCTATTGAATGAGAGGGTTGCAATAGTATCCCAGCTAGGGAGGCTTCAGATGAGCTACCAACCCTCCAATGCCACTATTAGGAACAGGGGCCACGATATCATGCTAGAATGGGTTGCTGGTGCAGGTTATCTTCAAATTAATGAAACTAAGTACGTGCTCAACCAATGTCACTGGCATTCCCCCTCTGAACACACCATAGATGGCAAAAGGTTTGATCTAGAGCTACACATGGTGCACGAAACTCCATCTGGACAAACAACTGTGATAGGAATACTGTACAAGATTGGAAGAAGACCAGATTCTTTCTTGTCATCGTTAACGAGTCATATAAAGGCCATTTCTAATAGCACGGAAGCAGAAAGAGTGGTGGGTGTAGTTGACCCTAGGCAAATCAAAATTTTCTACAAGCAGTATTACAGGTATATGGGCTCGCTGACTATTCCTCCTTGCACTGAGAATGTTTCTTGGACAATCGTTAGAGAGATACGATCCGTTTCAAAGGAACAGGTTAGATTGCTCCGAGCTGCTGTTCATGATGAATCAGAAACCAACGCAAGGCCACTGCAACTAATAAATAACCGCTTGCTGCAACTTTACGCGCAAAAATATATTAAACATTGA 816 0.4301 MEKLATTILICCSLLFLSISVISREVDDESEFSYEEESENGPSQWGNIHPEWSLCNNGSMQSPIDLLNERVAIVSQLGRLQMSYQPSNATIRNRGHDIMLEWVAGAGYLQINETKYVLNQCHWHSPSEHTIDGKRFDLELHMVHETPSGQTTVIGILYKIGRRPDSFLSSLTSHIKAISNSTEAERVVGVVDPRQIKIFYKQYYRYMGSLTIPPCTENVSWTIVREIRSVSKEQVRLLRAAVHDESETNARPLQLINNRLLQLYAQKYIKH 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01494 271 SUPERFAMILY Carbonic anhydrase 31 260 IPR036398 -
Phco10g01494 271 ProSiteProfiles Alpha-carbonic anhydrases profile. 30 265 IPR001148 -
Phco10g01494 271 CDD alpha_CA_prokaryotic_like 41 260 IPR041891 -
Phco10g01494 271 SMART Carb_anhydrase_2a 34 265 IPR001148 -
Phco10g01494 271 FunFam Alpha carbonic anhydrase 3 29 268 - -
Phco10g01494 271 Gene3D Alpha carbonic anhydrase 28 270 IPR036398 -
Phco10g01494 271 Pfam Eukaryotic-type carbonic anhydrase 40 261 IPR001148 -
Phco10g01494 271 PANTHER CARBONIC ANHYDRASE 29 259 IPR023561 GO:0004089|GO:0008270
Phco10g01494 271 ProSitePatterns Alpha-carbonic anhydrases signature. 127 143 IPR018338 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01494 Phco-Chr10 37686948 37689473 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01494 10 37686948 37689473 Phco10g01494 10 37686948 37689473 ECH
Phco9g00903 9 7083544 7085546 Phco10g01494 10 37686948 37689473 PCT