Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01377 ATGATTTCTCCGCACACAGAAAAACCCTTATTTTGGTTCTTCCTCCTTTTCCTCGTGTTGTTGCAGAAGCGATTCCAGATGGGCGTGGTCGACCAAGACTCTTCTCATTCCCAATCCAATCGGATCCTGATCCGTGAGGTCTGGGCCTCCAACCTTCAATCAGAATTCCAGATTATTCGCGACGTAATCGACAATTACCCTTTTGTTTCCATGGATACCGAGTTCCCCGGGGTTATCTACCTACCCCAAGTGGTGGCTCCGGCGGAACCCACCCGCTGCGCCCTTAAACCCTCCGAGCACTATCGCTTCCTCAAATCCAACGTCGATGTCCTCAACCTTATCCAGGTGGGTCTCACGCTTTCCGATGCAGACGGAAACCTCCCTCACATCGGGACCAGCAACAGTTTCATCTGGGAATTCAACTTCCGCGATTTCAACGTGGAGCGTGATTCCCACGCTCCTGACTCAATCGATCTACTCCGCCGTCAAGGGATTGACTTCCGGCGGCACGCAGCAGAGGGCATCGACTCCTGGCTTTTTGCGGAGTTGATGATGTCATCAGGATTGGTGTGTAACGAGGCGGTGAGTTGGGTGACGTTTCACAGCGCTTATGATTTCGGGTATTTGGTTAAGATTCTGACCCGACGGAGCCTGCCCCATGGGTTAACGGATTTCTTGAAGATTCTGAAGGTGTTTTTCGGAGAAAATGTTTACGACATGAAACACATGATGCGGTTTTGTGACACCCTTTATGGCGGTTTGGACCGGCTGGCACTAACCCTCAACGTGGACCGGGCTGTTGGGAAGTGCCACCAGGCCGGATCTGATAGCCTGCTGACGTGGCATGTGTTTAAGAGAATGAAGGATATTTATTTCGCGGAGGATGGGCCTCAGAGATATGCCGGTGTTTTATTTGGATTGGAGCTTGCTTGTTCTTCTAGTTGA 945 0.5111 MISPHTEKPLFWFFLLFLVLLQKRFQMGVVDQDSSHSQSNRILIREVWASNLQSEFQIIRDVIDNYPFVSMDTEFPGVIYLPQVVAPAEPTRCALKPSEHYRFLKSNVDVLNLIQVGLTLSDADGNLPHIGTSNSFIWEFNFRDFNVERDSHAPDSIDLLRRQGIDFRRHAAEGIDSWLFAELMMSSGLVCNEAVSWVTFHSAYDFGYLVKILTRRSLPHGLTDFLKILKVFFGENVYDMKHMMRFCDTLYGGLDRLALTLNVDRAVGKCHQAGSDSLLTWHVFKRMKDIYFAEDGPQRYAGVLFGLELACSSS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01377 314 Gene3D - 31 310 IPR036397 GO:0003676
Phco10g01377 314 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 43 308 IPR039637 GO:0004535|GO:0030014
Phco10g01377 314 Pfam CAF1 family ribonuclease 47 175 IPR006941 -
Phco10g01377 314 SUPERFAMILY Ribonuclease H-like 44 306 IPR012337 -
Phco10g01377 314 FunFam Putative CCR4-associated factor 1 7 34 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01377 Phco-Chr10 36385647 36386591 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01377 10 36385647 36386591 Phco10g01377 10 36385647 36386591 ECH
Phco10g01377 10 36385647 36386591 Phco9g01076 9 9569142 9569981 PCT