Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01357 ATGGATGTCGATTCCTCGATGGTGCCGGAGACCGATCACGATCCGGCCGTGCAGAACCACGCCGCCGCTGCTCCGCCGTCGGCTGAGACGGAAGGAGAGCAGCTAGAGGAGCCTCCGTCGTCTGGAGGCGGATCTCCGGCGCCTGCTGCGGCGCCGCAGAGTCCGTCGGGTGGACCGAGGCTGGCGCCAACTTATACTGTGGTGAATGCAATTTTGGAGAAGAAAGAGGACGGACCGGGGCCGAGGTGCGGCCACACATTGACGGCGGTGGCGGCGGTCGGAGAGGAGGGGACGTCGGGGTACATTGGCCCGAGGCTGATTTTGTTCGGCGGCGCCACTGCTCTTGAAGGAAATTCTGCCGCTTCAGGGACTCCTTCATCTGCTGGAAATGCGGGCATACGTTTAGCTGGTGCCACAGCTGATGTCCACTGTTATGATGTCTTGACTAATAAATGGTCTAGGTTAACTCCCTTTGGAGAACCTCCGACTCCAAGGGCAGCACATGTGGCGACTGCTGTGGGAACTATGGTGGTTATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCAGCTGAGGACCTTCATGTTCTTGATCTAACGCAGCAATGGCCACGCTGGCATAGAGTGTCTGTTCAGGGCCCTGGACCCGGACCACGTTATGGACATGTAATGGCTTTGGTGGGGCAGAGGTATCTAATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTGGCGGATGTATGGGCCTTGGACACAGCTGCCAAGCCTTATGAATGGCGCAAGTTAGAGCCAGAAGGAGAGGGTCCGCCTCCATGCATGTATGCAACTGCAAGTGCACGCTCGGATGGACTTCTTCTGCTCTGTGGAGGGAGAGATGCCAATAGTGTTCCATTGGCAAGTGCATATGGACTTGCTAAACATAGAGATGGTCGTTGGGAATGGGCAATTGCCCCAGGTGTCTCACCATCATCAAGATACCAGCATGCAGCGGTATTTGTCAATGCAAGGCTCCATGTGTCTGGTGGGGCTCTTGGTGGAGGAAGGATGGTCGAAGACTCATCAAGTGTTGCAGTATTGGACACTGCTGCTGGTGTTTGGTGTGATACGAAATCTGTTGTTACCAGTCCAAGAACTGGTAGGTACAGTGCTGATGCAGCAGGAGGAGATGCTGCAGTAGAGTTGACTCGACGTTGTAGGCATGCAGCTGCTGCAGTTGGTGACTTAATTTTTATTTATGGTGGTTTACGTGGGGGAGTCTTGCTAGATGACCTACTTGTTGCTGAAGATCTTGCAGCTGCTGAAACAACCACTGCTGCTTCACATGCTGCTGCAGCTGCAGCTGCATCTAATGTACAAGCTGGGCGCTTACCTGGACGATATGGATTTGTTGATGATAGAACAAGGCAAGCAATTCCTGAGGCAGCTGCTGATGGCTCTGTTGTTTTGGGAAATCCAGTTGCACCCCCAATGAATGGTGACATTTATACAGATATCAGCACTGAAAATGCCATGCTTCAGGGACCTCGGCGAACTGCTAAAGGTGTGGAGTATCTGGTTGAAGCATCAGCTGCAGAAGCTGAAGCTATCAGTGCAGCACTGGCTGCTGCCAAGGCACGGCAGGAGAATGGAGAGGCTGAAGTGCCTGAAAGAGACCGTGGGGCAGAGGCTACCCCAAGTGGGAAACAAACATCTTCCTTGATCAAGCCTGATTCTGCTGGTTCAAATAACGTTACCCCTGGTGGAGTTCGGCTGCATCACAGAGCTGTGGTTGTTGCTGCAGAGACTGGCGGTGCATTAGGTGGCATGGTTAGACAGCTTTCAATTGATCAATTTGAAAATGAAGGCAGGCGGGTTAGTTACGGGACACCAGAAAGTGCAACTGCTGCCAGGAAGTTATTAGATCGGCAGATGTCTATTAACAGTGTACCAAAAAAGGTCATTGCACACCTCTTAAAGCCTCGTGGATGGAAACCACCAGTACGGCGGCAGTTTTTTTTGGATTGTAATGAAATTGCTGATCTTTGTGACAGTGCTGAGCGGATATTTTCTGGTGAACCAAGTGTTTTACAACTTCGGGCACCAATTAAAATATTTGGTGACCTACATGGACAGTTTGGTGATCTCATGCGCCTTTTTGACGAGTATGGTGCACCATCAACTGCTGGTGACATTGCATATATCGATTATCTATTCCTAGGAGATTATGTTGATCGTGGACAGCACAGCTTGGAAACTATAACCCTTCTTCTTGCTTTAAAGGTTGAGTATCCCAACAACGTACATCTAATACGTGGAAATCATGAAGCTGCAGATATTAATGCACTCTTTGGTTTCCGAATTGAGTGCATAGAGAGGATGGGTGAGAGAGACGGAATTTGGACCTGGCATCGGATAAACAAGCTGTTTAATTGGCTTCCTCTAGCAGCCTTAATTGAGAAAAAAATTATTTGCATGCATGGTGGTATTGGTCGTTCAATAAATCATGTAGAGCAGATTGAAAACATTCAGCGTCCAATTCCAATGGAAGCGGGGTCAATTGTGCTTATGGATCTATTGTGGTCTGATCCGACAGAGAATGACAGTGTGGAAGGACTGCGGCCAAATGCTAGAGGTCCTGGATTAGTTACTTTTGGGCCTGATCGGGTGATGGAATTTTGCAACAACAATGATCTTCAACTAATTGTTCGTGCACATGAATGTGTGATGGATGGGTTTGAGCGTTTTGCCCAGGGACATTTGATCACGCTTTTTTCAGCTACAAATTATTGTGGTACCGCAAATAACGCCGGGGCAATATTAGTTTTGGGTAGAGACCTTGTTGTGGTTCCTAAACTGATTCATCCATTACCACCAGCAATTTCCTCGCCAGAAACGTCACCAGAACGTCACATTGAAGATACATGGATGCAGGAGTTGAATGCTAACAGGCCACCAACACCAACTAGAGGCCGCCCCCCAGTAACAAACGATCGAGGTTCGCTGGCTTGGATATAA 2991 0.4955 MDVDSSMVPETDHDPAVQNHAAAAPPSAETEGEQLEEPPSSGGGSPAPAAAPQSPSGGPRLAPTYTVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTSGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRLTPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQWPRWHRVSVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSSRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQAGRLPGRYGFVDDRTRQAIPEAAADGSVVLGNPVAPPMNGDIYTDISTENAMLQGPRRTAKGVEYLVEASAAEAEAISAALAAAKARQENGEAEVPERDRGAEATPSGKQTSSLIKPDSAGSNNVTPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSGEPSVLQLRAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINKLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPIPMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPPVTNDRGSLAWI 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01357 996 FunFam Serine/threonine-protein phosphatase 262 462 - -
Phco10g01357 996 SMART pp2a_7 665 949 IPR006186 GO:0016787
Phco10g01357 996 FunFam Serine/threonine-protein phosphatase 61 258 - -
Phco10g01357 996 Pfam Kelch motif 324 369 IPR011498 GO:0005515
Phco10g01357 996 SUPERFAMILY Kelch motif 137 426 IPR015915 GO:0005515
Phco10g01357 996 MobiDBLite consensus disorder prediction 539 579 - -
Phco10g01357 996 MobiDBLite consensus disorder prediction 556 577 - -
Phco10g01357 996 Gene3D - 262 455 IPR015915 GO:0005515
Phco10g01357 996 Pfam Galactose oxidase, central domain 217 270 - -
Phco10g01357 996 Gene3D - 629 967 IPR029052 -
Phco10g01357 996 FunFam Serine/threonine-protein phosphatase 629 969 - -
Phco10g01357 996 PRINTS Serine/threonine phosphatase family signature 889 909 IPR006186 GO:0016787
Phco10g01357 996 PRINTS Serine/threonine phosphatase family signature 911 927 IPR006186 GO:0016787
Phco10g01357 996 PRINTS Serine/threonine phosphatase family signature 799 825 IPR006186 GO:0016787
Phco10g01357 996 PRINTS Serine/threonine phosphatase family signature 693 720 IPR006186 GO:0016787
Phco10g01357 996 PRINTS Serine/threonine phosphatase family signature 728 755 IPR006186 GO:0016787
Phco10g01357 996 PRINTS Serine/threonine phosphatase family signature 761 785 IPR006186 GO:0016787
Phco10g01357 996 Gene3D - 57 261 IPR015915 GO:0005515
Phco10g01357 996 Pfam Calcineurin-like phosphoesterase 693 900 IPR004843 GO:0016787
Phco10g01357 996 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 996 - -
Phco10g01357 996 PIRSF STPPP_BSU1 28 996 IPR012391 GO:0004721|GO:0009742
Phco10g01357 996 MobiDBLite consensus disorder prediction 972 996 - -
Phco10g01357 996 ProSitePatterns Serine/threonine specific protein phosphatases signature. 762 767 IPR006186 GO:0016787
Phco10g01357 996 MobiDBLite consensus disorder prediction 541 555 - -
Phco10g01357 996 MobiDBLite consensus disorder prediction 1 62 - -
Phco10g01357 996 SUPERFAMILY Metallo-dependent phosphatases 650 956 IPR029052 -
Phco10g01357 996 CDD MPP_Bsu1_C 645 947 IPR041758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01357 Phco-Chr10 36099939 36110391 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01357 10 36099939 36110391 Phco9g01104 9 10059314 10077529 PCT