Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01349 ATGGAGTCTCAGCTTCACCCAAAGCTCAACCATCTTTTATGCTTATTCATCCTTACCCTTTCATTTGCCCACGCTCAAGCTACTACCTTCGGATATTGCGCTGATGTGAACTATGCTGTAAAGGTGTCTGGAGTTGAAATCACACCAGACCCTGTTGCACGTGCTAGGCCTGTCACCTTTAAAATTTCAGCTGCTACTGGTGAAGCTATTTATGGAGGAAAGTGGGTAATTATAGTTACATACTTCGGCTTTGTTGTCCATAAAGAAATCCATGATTTTTGTGAGGAAGTATCTTGTCCTGTTGCTACTGGCAGTTTTGTGGTTGCTCACACCCAAAAGTTGCCTGCATTTGCCCCACCGGGCACCTACACCGTGGAGATGACACTAAAAAATGAAAAGAACAAGCCATTAACATGCATCACCTTTAATTTCAAAATCGGTTGGGGATTTTTGGTGTCCAATATCTGA 468 0.4295 MESQLHPKLNHLLCLFILTLSFAHAQATTFGYCADVNYAVKVSGVEITPDPVARARPVTFKISAATGEAIYGGKWVIIVTYFGFVVHKEIHDFCEEVSCPVATGSFVVAHTQKLPAFAPPGTYTVEMTLKNEKNKPLTCITFNFKIGWGFLVSNI 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01349 155 FunFam Putative phosphatidylglycerol/phosphatidylinositol transfer protein isoform A 28 149 - -
Phco10g01349 155 SUPERFAMILY E set domains 27 146 IPR014756 -
Phco10g01349 155 CDD PG-PI_TP 30 144 IPR033917 GO:0032366
Phco10g01349 155 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 10 146 IPR039670 GO:0015918|GO:0032934
Phco10g01349 155 SMART pgtp_13 30 144 IPR003172 -
Phco10g01349 155 Pfam ML domain 28 146 IPR003172 -
Phco10g01349 155 Gene3D - 28 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01349 Phco-Chr10 36018483 36021120 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01349 10 36018483 36021120 Phco10g01349 10 36018483 36021120 ECH
Phco10g01349 10 36018483 36021120 Phco9g01108 9 10107176 10111129 PCT