Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01293 ATGGTGCAATCCCCAATGGTTGACTTGAATCTAATGACCTTCTCACAAACCCACCCCGTGGAATGCACATGGAGAGAAATAGGTATCAAAACTATATTTCCATTTTTCAAGTTTTCTTATAATATTCCACTCATTATGAAATCTGCATCTGCTAAACTTCGTCGAGCTCCCTCGGTAATCATGAAAACGACACTCAACAGTCCTGTCAAAACCAAACCTACTCTGACGAAATTCATTTTAGTCTCGTCTTTATTTTGTGTCATTTCTCTCTGTGTATCAGTGCTACTCCTAGCCAAAACAAAGATAATAGACCTGAGTAATTCACCACAACATGATGTGTCACAGTCGGATCCTACCACTGTTGATCATCTTGTATTTGGAATTGCCTCAACCGGAACTTTATGGCCTTCGAGGAAGCAATACACCAAGCTTTGGTGGAACAGCATACCCAATATAACAATGAGAGGATGTGTTTTCGTAGATGCCCTCCCACATGAAGAAAATGTCAACAATGATGATTCTCTTCCTCCTCTTTGTGTCTCTCAAGACACTTCCCAGTTTCTCTACACTTACAAGCGTGGTCTACGCTCAGCAATCCGTGTGGCACGTGTTGTGAAAGAGACTGTGGCACTGAACCATTCTAGTGTTAGATGGTATGTGTTTGGGGATGATGACACCATTTTCATCCCTCACAATCTGCTCAAAACTCTTTCCAAATATGATCATAGGCTTTGGTACTATGTTGGGTCCAACTCAGAGATGTATGAGGGCAACCAGGTTTATGGTTTTGGAATGGCTTTTGGTGGAGGTGGTTTTGCCATCAGTTCCTCCCTAGCACAAGTCCTAGCCAAGGTTCTTGATTCATGCATACAAAGGTATCCGCATCTGTTTGGAAGTGATTCAAGGGTGTACTCTTGCTTAACTGAACTAGGTGTGGGATTAACACATGAACCAGGTTTTCATCAGGTTGATTTGCGGGGAAATATCTTTGGCCTATTGGCTTCTCATCCGTTAACTCCCTTATTGTCCCTACATCACCCAGATATCTTTGATCCTATCTTTCCTAACATGTCAAGTATAACATCGCTGCAACATTTATTTGAAGCTGTTCATGTTGATTCCGAGAGGATACTACAACAAACAGTTTGTTATGAAAAGCAGTTGTCATGGACAATTTCAATATCATGGGGCTATGCTGTTCAAGTGTTTCAGAACAATATGCTTTTGCCAGAGGTTCTGAGAGTGGAAAGAACATTCAGACAATGGTTGAAAGGGAATTTTTTGAGAGGAATATATAATTTCAATACAAGAGAAGTTCACCCTGATCCATGTAAAAGAGGTACCATCTTCTATCTAGATAAAGTGTCTTCTGGGAAAGATGGTATCATGAGCAGTTACAAGAGAGATTTTCAAAATTGTTCATACGAGGCATCCATGAGTAAATTGGAAGTGATCAACGTGGTGACAAATAAGTTACACCTTGACAACAAACAGACTCCAAGACGGCACTGTTGTGATGTGTTGCCCTCTAATGCTGGTAACTTGATGGAAATTGCAGTCAGAGAGTGCAATTATGAAGAACTGATCTATATGAACTGA 1599 0.4071 MVQSPMVDLNLMTFSQTHPVECTWREIGIKTIFPFFKFSYNIPLIMKSASAKLRRAPSVIMKTTLNSPVKTKPTLTKFILVSSLFCVISLCVSVLLLAKTKIIDLSNSPQHDVSQSDPTTVDHLVFGIASTGTLWPSRKQYTKLWWNSIPNITMRGCVFVDALPHEENVNNDDSLPPLCVSQDTSQFLYTYKRGLRSAIRVARVVKETVALNHSSVRWYVFGDDDTIFIPHNLLKTLSKYDHRLWYYVGSNSEMYEGNQVYGFGMAFGGGGFAISSSLAQVLAKVLDSCIQRYPHLFGSDSRVYSCLTELGVGLTHEPGFHQVDLRGNIFGLLASHPLTPLLSLHHPDIFDPIFPNMSSITSLQHLFEAVHVDSERILQQTVCYEKQLSWTISISWGYAVQVFQNNMLLPEVLRVERTFRQWLKGNFLRGIYNFNTREVHPDPCKRGTIFYLDKVSSGKDGIMSSYKRDFQNCSYEASMSKLEVINVVTNKLHLDNKQTPRRHCCDVLPSNAGNLMEIAVRECNYEELIYMN 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01293 532 Gene3D - 112 370 - -
Phco10g01293 532 Pfam Protein of unknown function, DUF604 258 505 IPR006740 -
Phco10g01293 532 PANTHER FRINGE-RELATED 76 529 - -
Phco10g01293 532 FunFam Fringe-related protein-like 111 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01293 Phco-Chr10 35260065 35261977 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01293 10 35260065 35261977 Phco10g01293 10 35260065 35261977 ECH
Phco10g01293 10 35260065 35261977 Phco9g01191 9 11357812 11360960 PCT
Phco9g01190 9 11354587 11357475 Phco10g01293 10 35260065 35261977 PCT