Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01217 ATGGGCTGTTGTGTCTCAACAAGTAGTCAGAGTACTCGTACTAGCAGGAGCACTGGAGACACAAACGTTCCGACGTGTCTAGAAATAGGATTCTGTGGTCAAAAGAGTGCGAGGAGAACATCCTCTGATCATGTTGTCTATCTGCACCAATTACCATCCTTACCCAACAGAATTTTCACCAATGGAAAGAGCAGATCTTCTTGCATATTTACACAGCAGGGTCGTAAGGGTATTAATCAGGATGCCATGATTGTATGGGAAGATTTCATTTCGGAAGATGTGACCTTTTGTGGTGTCTTTGATGGCCATGGTCCACACGGTCACCTTGTTGCACGCAAAGTCCGGGAAGCCTTGCCACTCAAACTGCTTTCATTTTTGCATTCCTCCGAATCAGGGCAAAATTGTTCAGGTAAAACTTGTTTCAGAGGCAGCATGAAGCCTGAAAATGGAGAGTCTGAGAAAGATGTTACTACTGAAGATAAACTGAATTCTATGTGGAGAGAAGCTTTCATGAAGGCATACAAGGCTATGGATAAAGAGCTGAGGTCTCATCCAAATTTGGACTGCTTTTGTAGTGGGAGCACAGCTGTCACTGTAGTGAAACAGGGTTCAAATTTATTCATGGGCAATATTGGGGATTCCCGAGCAATCATGGGATCCAAGGACAGCAATGACGTCATGGTGGCAATTCAGTTGACCATTGATTTGAAGCCTGATTTGCCAAGAGAAGCAGAAAGAATCAAACGATGCAAGGGTAGGGTGTTTGCATTACAAGATGAGCCAGAAGTTCATAGGGTATGGTTGCCTTTTGATGATGCACCAGGATTAGCAATGGCTCGAGCATTTGGAGATTTTTGCTTGAAGGAATACGGTGTGATTTCTATACCTGATTTTTCTCATCGGTTACTAACAGACAAAGATCAGTTCATTGTTCTTGCCTCAGATGGGATCTGGGATGTCTTGAGCAATGAAGAGGTGGTTGGGATAGTATCTTCAGCACCAACTCGATCATCAGCAGCAAGGCTTCTGGTGGATTCGGCGGCTCGAGAGTGGAAACTTAAATATCCTACTTCAAAAGTGGATGACTGTGCTGTTGTGTGTCTATTTCTGGATGGAAAAATGGATTCAGAATCTGATTGTGATGAGCAATGCTTCTCTTCTGCTATCATCTCGAGCAACCATTCAGTTAATCTGGTAGAGACAGATGATGGTCAAAAGTCTGAGCCAACTTTGCAAAGGAACTTTACTGTGAGATCCTCAGAAGAAAATGGCGCCTACGGAGGAAGAGGAGTATCTGTTGATGTTGTTGAAGATGGAGCATCAGGGCCTGAAGATGAAAACTGGTTAGGTTTGGAGGGTGTGACACGAGTAAACTCACTGGTTCAACTTCCTAGATTTTCTGAGGAAAAGCCAAACTGTTGA 1422 0.4374 MGCCVSTSSQSTRTSRSTGDTNVPTCLEIGFCGQKSARRTSSDHVVYLHQLPSLPNRIFTNGKSRSSCIFTQQGRKGINQDAMIVWEDFISEDVTFCGVFDGHGPHGHLVARKVREALPLKLLSFLHSSESGQNCSGKTCFRGSMKPENGESEKDVTTEDKLNSMWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTVVKQGSNLFMGNIGDSRAIMGSKDSNDVMVAIQLTIDLKPDLPREAERIKRCKGRVFALQDEPEVHRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPDFSHRLLTDKDQFIVLASDGIWDVLSNEEVVGIVSSAPTRSSAARLLVDSAAREWKLKYPTSKVDDCAVVCLFLDGKMDSESDCDEQCFSSAIISSNHSVNLVETDDGQKSEPTLQRNFTVRSSEENGAYGGRGVSVDVVEDGASGPEDENWLGLEGVTRVNSLVQLPRFSEEKPNC 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01217 473 CDD PP2Cc 65 370 IPR001932 -
Phco10g01217 473 PANTHER PROTEIN PHOSPHATASE 63 368 IPR015655 GO:0004722|GO:0006470
Phco10g01217 473 MobiDBLite consensus disorder prediction 1 20 - -
Phco10g01217 473 SUPERFAMILY PP2C-like 57 372 IPR036457 -
Phco10g01217 473 Gene3D - 58 378 IPR036457 -
Phco10g01217 473 Pfam Protein phosphatase 2C 92 347 IPR001932 -
Phco10g01217 473 FunFam probable protein phosphatase 2C 52 57 373 - -
Phco10g01217 473 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Phco10g01217 473 SMART PP2C_4 55 368 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01217 Phco-Chr10 34257990 34260416 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01217 10 34257990 34260416 Phco10g01217 10 34257990 34260416 ECH
Phco10g01217 10 34257990 34260416 Phco9g01270 9 13000006 13002942 PCT