Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01053 ATGATTTCCTCCAGCAAACTCAAATCCGTGGATTTTTACAGAAAAATCCCAAGAGATTTAACTGAGGCATCATTATCCGGAGCAGGGTTATCCATAGTAGCAGCTCTCTGCATGGTGTTTTTGTTTGGAATGGAACTTAATAGTTATTTGTCTGTCAGCACCGCTACATCTGTTATTGTTGACAAGAGTAGTGATGGGGACTATTTACGTATAGATTTCAATATGAGTTTTCCTGCCCTCTCTTGTGAGTTTGCAGCTGTTGATGTGAGTGACGTGCTGGGCACAAACAGGCTGAATCTAACCAAAACAATTCGCAAGTTTTCTATTGATTCAAATTTAAGATCCACTGGTAACGAGTTCCATTCAGAACCAACTACTACCAACATAAAGCACGATAATGAACAACATGAAGAATCCATTGGAGGTGCTCTTGAACTCACAACAGATAATTTTGATAAATATGCTCACCAGTTTCCAATTACAGTTATTAATTTTTATGCTCCTTGGTGTTATTGGAGTCAACGATTGAGACCTTCATGGGAAAAAGCATCTAAAATAATTAAAGAGAGATATGATCCAGAAGCGGATGGTCGTATTGTTATGGGGAGGGTAGATTGTACTCAAAATGGAGAATTGTGCAGGAGCCATCATGTACAAGGGTATCCTTCAATTCGTATCTTTCGAAAAGGAAGTGATGTAAGGACTGACCATGGACATCATGATCACGAGTCCTATTATGGTGATCGCGACACAGATAGCCTAGTCAAGACAATGGATAATTTAGTGGCGTCTCTCCCTACAGAATCTCAAAAGTTACATTTGGGGGATAAATCCAATCTGGCGTCACACATAAAAAGACCAGCACCATCATCTGGTGGATGTAGAATTGAAGGATATGTGCGTGTCAAGAAGGTTCCTGGAAACTTGATCATCTCAGCTAGATCTGATGCTCATTCCTTTGATGCTTCTCAAATGAACATGTCACATGTCGTAAACCACTTATCTTTTGGAAGGAAAGTGTCACCTAGGGTTATGAGTGATGTGAAGCGCTTGATACCTTATGTTGGTAGCAGCCATGACAGGCTGAATGGCCTGTCATTTATCAACACACGTGATTTTGGAGCAAATGTTACTATGGAGCATTACCTTCAGATAGTTAAAACAGAGGTGATAACAAGAAAAGATCATAAATTAGTTGAGGAGTACGAGTACACAGCGCACAGCAGTGTGGCACAGAGTTTACACATTCCTGTTGCCAAGTTCCATCTTGAGCTCTCCCCCATGCAGGTCTTAATAACGGAAAATCCGAAGTCCTTTTCTCACTTCATTACAAATGTCTGTGCTATTATTGGGGGTGTTTTCACGGTTGCTGGAATTTTGGACTCGATTTTGCATAACACTATTAGACTAATGAAAAAAGTTGAGCTTGGCAAAAATTTTTGA 1443 0.4006 MISSSKLKSVDFYRKIPRDLTEASLSGAGLSIVAALCMVFLFGMELNSYLSVSTATSVIVDKSSDGDYLRIDFNMSFPALSCEFAAVDVSDVLGTNRLNLTKTIRKFSIDSNLRSTGNEFHSEPTTTNIKHDNEQHEESIGGALELTTDNFDKYAHQFPITVINFYAPWCYWSQRLRPSWEKASKIIKERYDPEADGRIVMGRVDCTQNGELCRSHHVQGYPSIRIFRKGSDVRTDHGHHDHESYYGDRDTDSLVKTMDNLVASLPTESQKLHLGDKSNLASHIKRPAPSSGGCRIEGYVRVKKVPGNLIISARSDAHSFDASQMNMSHVVNHLSFGRKVSPRVMSDVKRLIPYVGSSHDRLNGLSFINTRDFGANVTMEHYLQIVKTEVITRKDHKLVEEYEYTAHSSVAQSLHIPVAKFHLELSPMQVLITENPKSFSHFITNVCAIIGGVFTVAGILDSILHNTIRLMKKVELGKNF 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01053 480 FunFam Protein disulfide-isomerase 5-4 131 286 - -
Phco10g01053 480 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Phco10g01053 480 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 5 479 IPR045888 -
Phco10g01053 480 Pfam Endoplasmic reticulum vesicle transporter 290 461 IPR012936 -
Phco10g01053 480 Pfam Thioredoxin 144 242 IPR013766 -
Phco10g01053 480 ProSiteProfiles Thioredoxin domain profile. 111 263 IPR013766 -
Phco10g01053 480 Gene3D Glutaredoxin 125 283 - -
Phco10g01053 480 SUPERFAMILY Thioredoxin-like 144 261 IPR036249 -
Phco10g01053 480 CDD PDI_a_family 144 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01053 Phco-Chr10 31384528 31395867 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01053 10 31384528 31395867 Phco10g01053 10 31384528 31395867 ECH