Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01051 ATGTGGAGAGATCCGGGAGTTTCAGCTGATTCTTTCTATGAAATCCGCCCCGAATGTACCGATGTTCCCATTTCTCGATTTAAAATCAAGGCTGGTAAAACACTAAGTGCAAGAAAATGGCAAGCTGCATTTACTCGAGAAGGGTATCTAGATATAGGCAAGACTCTAAGCCGAATCTGCCGTGGGGGAGTCCATCCATCTATTAGGAGAGAAGTTTGGGAATTTCTACTTGGTTGCTATGATCCCAAGAGTACATTTGAGGAAAGAGATCAGATAAGACATCGCCGAAGAATGCAATATGCTACAATTAAAGAAGAATGCCGCCAATTGTTTCCTCTTGTTGGAAGTGGTAGATTTGTCACAGCACCTGTTGTTACTGAAGATGGTCTGCCTATTCAAGATCCATTGGTTCTGAAAGAAACAAATTCAGCCAAGGGATTGGCTGTACATAATCAAGATAATAATAATCATTCAAGAATGGTTGCTACAAATAGTTTAAAGAAGGTGACAGACAAGATAGTAGTCCAGTGGCTGTTAACTCTCCATCAAATAGGTCTTGATGTGGTTCGCACTGATAGGACATTAGTTTTTTATGAGAGGCAAGAAAACCTGTCAAAATTATGGGATGTTCTATCTGTTTATGCCTGGATAGATAAAGACGTAGGCTATGGTCAAGGAATGTGTGACCTATGCTCCCCTATGATAATTCTTCTTGATGATGAAGCAGACGCATTTTGGTGCTTTGAGCGTTTGATGCGCAGGCTTCGCGGCAATTTTAGATGCACCGAGAGCTCTGTTGGGGTGACATCACAACTAAGTGATTTGGCTTCAGTTACTCAAGTAATTGATCCAAAACTTCATGACCATTTAGAGCATCTTGGTGGAGGTGACTATCTGTTTGCTTTTCGAATGCTAATGGTTTTGTTTCGTCGAGAATTCTCTTTCTGTGATTCATTGTTTCTTTGGGAGATGATGTGGGCCTTGGAATATGATCCTGATTTGTTCTTGATGTATGAAATGCCTGAATCAGCTTCTGAAAAAGCTGTGGGCTCAAAGGGGAAATCAAAATCAATACGTCAATGTGGAAAGTATGAGAGAGAATTTTTGAAGAGTGGATCAAAGAATGCTTCTGAAGCTCCTCTTCCTATATCTGTTTTCCTTGTTGCTAGTGTATTGAAAGATAAAAGTGCAAAACTACTCCAAGAAGCGCGGGGTTTGGATGATGTTGTCAAGATTTTGAATGACATAGCTGGGAATCTAGATGCCAAAAAAGCTTGTAGTGGGGCTATGAAACTTCACAAGAAATATTTGAAAAAGGCCAAGAAACACTAG 1332 0.4032 MWRDPGVSADSFYEIRPECTDVPISRFKIKAGKTLSARKWQAAFTREGYLDIGKTLSRICRGGVHPSIRREVWEFLLGCYDPKSTFEERDQIRHRRRMQYATIKEECRQLFPLVGSGRFVTAPVVTEDGLPIQDPLVLKETNSAKGLAVHNQDNNNHSRMVATNSLKKVTDKIVVQWLLTLHQIGLDVVRTDRTLVFYERQENLSKLWDVLSVYAWIDKDVGYGQGMCDLCSPMIILLDDEADAFWCFERLMRRLRGNFRCTESSVGVTSQLSDLASVTQVIDPKLHDHLEHLGGGDYLFAFRMLMVLFRREFSFCDSLFLWEMMWALEYDPDLFLMYEMPESASEKAVGSKGKSKSIRQCGKYEREFLKSGSKNASEAPLPISVFLVASVLKDKSAKLLQEARGLDDVVKILNDIAGNLDAKKACSGAMKLHKKYLKKAKKH 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01051 443 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 152 259 - -
Phco10g01051 443 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 267 436 IPR035969 -
Phco10g01051 443 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 35 414 - -
Phco10g01051 443 SMART tbc_4 60 352 IPR000195 -
Phco10g01051 443 FunFam TBC1 domain family member 15-like 161 259 - -
Phco10g01051 443 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 38 289 IPR035969 -
Phco10g01051 443 ProSiteProfiles TBC/rab GAP domain profile. 63 329 IPR000195 -
Phco10g01051 443 Pfam Rab-GTPase-TBC domain 154 327 IPR000195 -
Phco10g01051 443 Gene3D - 265 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01051 Phco-Chr10 31350506 31358195 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01051 10 31350506 31358195 Phco10g01051 10 31350506 31358195 ECH