Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01022 ATGAAGCACTTTGGAATGGGTATTCAACAATTTATGGGTGTCACAAAGGTTATCTTTTGCAGCATTTTGGTTTTTCATATTTTGGCCGTAGTCAGCAGTGAAGAGAAGAAAACGGAAGAAGAATTCATCAGCCAACTATTTGATCCTACATCTGGACTATTAACTGAGGATACGGTAGAGGTACTATGGATCATATGTTGGGAAGATTTGATTCGATTAAAGAAAGAAGTCGACGATTTTGGCTTTTGCCTCCCAAGGGAATTATGCAGAAACACCAATGAAGTTAGTTTAGAAATTGGCTCAGTAGCTAGAGAAAACATCCAAAAAATAATCAATGCATGTTGTCCTCAATTGAAGGAAAATGTTCTTAACTGTTTCAGAAAAAACAATTTTCCATTTCATCCTCTCAAGGAAGAGGCTGTCTCCAAGATTTGGCATGCAACATACATGGGATCACCTTCATCTAGAAGATATTTGGGTCAAATTTTGCCCCAGCACCTATCTGAAACACCAAACAAGGAACATAAATTACATACAAATATTAAAGATCAAGACTCTGCATCTAAATCTTCCCACTCTAAGGATAAAGATAAAGCATCTGGGACTAGTATGGCAATACCTATAGTGGTAGCATTTGTAGCTGTAGCATTGCTCATTTTATGTTGTTATCGATTTTGTGGGAGTGGACAAGTTAGCCAAAATGATGAGAGACCCCTTCTCAGCATGAGCATGAATGAATACTCAGTTGGTTCTTCTTCGAATAATAATATTGCATTCCAAAATTCAATGAAAGAAGGACCAATTGGGATTCACTCATCAAGTATTCAATTGGTTGATGAGAAGAGGAACTCAGTCTCGGTGCATGAAGCTCAATTAGGAGAAATTGCTAATGCTTCTTTTGTAAGACCATCATTTGAACTAAAACCTCCTCCTGGGAGAGCAGTAGTAAATGGATTGCTTCCTTTGAAACCTCCTCCTGGAAGGCCTGATCTTCTTCCTCCTCCTGAACCAATTAAACCTCCTGATAATCCCATTGTTCCTTCACCACCTGCTCCAACTTCTCCTTCTCCTCCTCCTCCCCCTCCCCCTCCTCCTCCTCGTCTTCAAACACCACCAAAGCCCACCAATGCTGGCCCTCCACCTCCTCCACCTCCTAGGAATGGCCCTAGACCACCACCCCCTCCTCCTGGCAAAGGCCCCAGAGCTCCTCCACCACCACCACCTAGATCCAAGGGCGGTCCTGGTGCTGGTCATAGACCTCCTCCACCCCCCAAAAGTGGTGCAGGTCCACCAAGAGCTCCTTCCGGTAAGGTTGTTGAGGAAGAAGCCGACTATGAAGGTGAAGGGTATGTTCCTAAAGCTAAGTTAAAGCCTTTCTTCTGGGATAAGGTTCAAGCTAACTCAGATCAAACAATGGTATGGAATCAACTCAAAGCAGGATCGTTCCAGTTTAATGAAGAAATGATGGAGACACTATTTGGCTATAATGCCATGGCTGTGGATAAAGGAAAAGGCCAAGCAAAAAAAGAAGTTGCCTCCCAAGCAGCTACTCCCCAACTTATACAAATCATTAACTCAAAGAAAGCACAAAATTTATCTATTCTATTAAAAGCATTGAATGTGACCGCAGATGAAGTTTGTGATGCACTTCTTGAAGGAAATGAGCTCCCCACAGAATTCCTTCAAACCTTGTTGAAGATGGCACCAACGTCAGAGGAAGAACTTAAGCTTAGAGTTTTCACTGGTAATACAGCCCTACTCACCCCTGCAGATAGGTTCCTTAAAGCCGTAGTTGACATTCCCTGTGCTTATAAACGAATGGAAGCACTAATTTACATGGGTACTCTTCAAGAGGATCTCACTAGTACTCGAGATTCCTTTGCAATTTTAGAGGTTGCTTGTAAAAAGCTAAGAAGCAGTCGATTATTCCTCAAGCTTCTTGAAGCTGTTCTCAAAACTGGCAATCGTATGAATGATGGGACATTCCGTGGTGGTGCACAAGCATTCAAACTCGATACACTGTTGAAATTATCTGATGTAAAAGGAGTAGATGGCAAGACCACGCTCTTGCACTTCGTTGTTCAAGAGATAATGCGCACTGAGGGCATAAGAGCTGCACGCATGGCAAAAGAGAATCACAGTTTCTCCAGCATAAAAACAGAAGACCTTCTTGAGGACATCTCATATGAATCAGATGACCACTATCGGGAACTTGGTCTTCAAGTGGTTTCACGATTAAGCACTGAACTTGAGAATGTGAAGAAAGCAGCAGCTTTAGATGCTGATGGCTTAGTAGGAACAACTTCAAGACTAGGGCATGGTCTCATAAAAACAAGAGACTTCGTAATCAATGACATGAGAAACGTGAAGGGTGATAAAGGGTTTTATGAGACAGTGAAGAGTTTCGTGGAGAAAGCTGAGGCTGATGTCAAAAGTTTGCTAGAAGAGGAGAAGAAAATCATGGGTCTAGTGAAGAGCACTGGTGATTACTTTCATGGGGATTCAGGGAAGGATGAAGGGCTGAGATTGTTTATAATAGTACGTGATTTCTTAGTAATGTTGGATAAGGTGTGCAAGGAGATACAACTTGCACCACCAAAGAAGCCAACAGCAAAAAGTGCAAAGCAAGAAACACCTAATCATTCTAGAAAACCTTCTTCCTCTGATACTCTTCCTCCTTCTTCTCATGATTTAATGCGTCAACGAATTTCTCCAGCAATCGCAAACAGGAGGATGGATGACTTTAGTTCAGATGATGACAGTCCTTAG 2769 0.4207 MKHFGMGIQQFMGVTKVIFCSILVFHILAVVSSEEKKTEEEFISQLFDPTSGLLTEDTVEVLWIICWEDLIRLKKEVDDFGFCLPRELCRNTNEVSLEIGSVARENIQKIINACCPQLKENVLNCFRKNNFPFHPLKEEAVSKIWHATYMGSPSSRRYLGQILPQHLSETPNKEHKLHTNIKDQDSASKSSHSKDKDKASGTSMAIPIVVAFVAVALLILCCYRFCGSGQVSQNDERPLLSMSMNEYSVGSSSNNNIAFQNSMKEGPIGIHSSSIQLVDEKRNSVSVHEAQLGEIANASFVRPSFELKPPPGRAVVNGLLPLKPPPGRPDLLPPPEPIKPPDNPIVPSPPAPTSPSPPPPPPPPPPRLQTPPKPTNAGPPPPPPPRNGPRPPPPPPGKGPRAPPPPPPRSKGGPGAGHRPPPPPKSGAGPPRAPSGKVVEEEADYEGEGYVPKAKLKPFFWDKVQANSDQTMVWNQLKAGSFQFNEEMMETLFGYNAMAVDKGKGQAKKEVASQAATPQLIQIINSKKAQNLSILLKALNVTADEVCDALLEGNELPTEFLQTLLKMAPTSEEELKLRVFTGNTALLTPADRFLKAVVDIPCAYKRMEALIYMGTLQEDLTSTRDSFAILEVACKKLRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGVDGKTTLLHFVVQEIMRTEGIRAARMAKENHSFSSIKTEDLLEDISYESDDHYRELGLQVVSRLSTELENVKKAAALDADGLVGTTSRLGHGLIKTRDFVINDMRNVKGDKGFYETVKSFVEKAEADVKSLLEEEKKIMGLVKSTGDYFHGDSGKDEGLRLFIIVRDFLVMLDKVCKEIQLAPPKKPTAKSAKQETPNHSRKPSSSDTLPPSSHDLMRQRISPAIANRRMDDFSSDDDSP 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01022 922 ProSiteProfiles Formin homology-2 (FH2) domain profile. 446 880 IPR015425 -
Phco10g01022 922 MobiDBLite consensus disorder prediction 322 430 - -
Phco10g01022 922 MobiDBLite consensus disorder prediction 317 444 - -
Phco10g01022 922 MobiDBLite consensus disorder prediction 873 897 - -
Phco10g01022 922 SMART it6_source 446 869 IPR015425 -
Phco10g01022 922 Gene3D Formin, FH2 domain 451 888 IPR042201 -
Phco10g01022 922 PANTHER FORMIN-RELATED 155 893 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Phco10g01022 922 MobiDBLite consensus disorder prediction 865 922 - -
Phco10g01022 922 MobiDBLite consensus disorder prediction 169 199 - -
Phco10g01022 922 ProSitePatterns Serine proteases, subtilase family, serine active site. 201 211 IPR023828 -
Phco10g01022 922 Pfam Formin Homology 2 Domain 450 854 IPR015425 -
Phco10g01022 922 SUPERFAMILY Formin homology 2 domain (FH2 domain) 403 862 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01022 Phco-Chr10 30725110 30730041 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01022 10 30725110 30730041 Phco10g01022 10 30725110 30730041 ECH
Phco10g01022 10 30725110 30730041 Phco9g01619 9 38011288 38017194 PCT