Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00950 ATGGCCAACTTCCTCGCTCAGTTCCAGACAATAAAAACCACATCCGATCGCCTCGTCATTTCAGTGGAGGATGTGAGTGACTTGTGGCCAACTGTCAAACCTGCTTTTGAGGGGCGTTTGCCGTTCAAACGGGCGACTTTGAATAACAAGACACGGAATCCTGTCTCTGTTGACACATTGCCGGCCGAGTTTATACTAACTACTGATTCAAGACTACGCAGCCGGTTCCCTCAGGAGCAGTTTTTATTTTGGTTTCGAGAGCCTTATGCAACAGTTGTACTTGTCACCTGTGAGGATCTGGATGAGTTCAAAACCATCCTTAAACCACGTCTGAAATTAATTGTCCAAAATGATGAAAGGGAGTGGTTTGTTGTATTTGTATCAAAAGCTCATCCAGCTAACGATCAGGCAAACAAAATGGCGAAGAAAGTATATGCTAAACTCGAAGTTGAGTTTAATACCAAAAAGAGAGAAAGATGTTGCAAATATGATATACATTTGCCTGAAGCAAACTTTTGGGAGGATCTAGAATCAAAGATAATGGAATGCATCAGAAATACGCTGGATAGACGTGTACAATTTTATGAGGATGAAATACGAAAGCTCAGTGAACAGCGCCTCATGCCAGTCTGGAACTTCTGCAATTTTTTTATTCTGAAGGAAAGCTTGGCTTTTATGTTTGAAATGGCTCACCTTCATGATGATGCATTACGGGAATATGATGAGCTGGAACTCTGCTATCTTGAAACAGTTAACATGACTGGAAAGCAGAGAGATTTTGGAGGGGCTGATCACGGTGATGATCAGGCAGCATTGGTTAATCCAAGAAATAAACCATTGACACAGATGGTTCAAGAGGATTCATTTAGGGAGTTTGAATTCAGACAGTATCTATTTGCATGTCAATCAAAGCTCTTATTCAAGCTAAATCGTCCCATTGAGGCTGCAACACGAGGCTATTCATTCATAATAAGCTTCTCTAAATCCTTGTCATTGCATGAGCGTATTCTGCCATTTTGTATGCGTGAAGTCTGGGTAGCAACTGCTTGCTTGTCTTTAATTGAAGCAACCACTTCAAATTATACTGATGGACATGTGGCGCCTGATATAGAGAAGGAGTATTTTCGTCTTCTGGGTGACCTATACTCTCTATCTAGACTTAAGTTCATGAGGCTTGCCTATTTAATTGGGTATGGAACTGATATAGAAAGAAGCCCTGTCAACAGTGCTTCCCTCAGCTTGCTACCTTGGCCTAAGCCAGCTGTCTGGCCTTCACTTCCTGCTGATGCATCTGCGGAGGTGCTTGAGAAAGAAAAGCTTATTCTCCAAACAACTTCCAGAACCAAGCACTTTGGTATCCAAAGGAAACCCCTGCCCCTTGAACCTACTGTTCTTCTGCGAGAGGCCAACAGGCGTAGGGCTTCACTTTCAGCTGGAAATGTGTCTGAAATGTTTGACAATCGCCAGGGTCCATTGGATGGATCAGGTTTCGATGCATCCACAAGAATGTCACCACACAAAGCACCTGCAAATTCCATGTCACGTACAAATTCATCACCAGGAAACTTCGATAGTTCAATTGACCGACCAATGAGGCTTGCTGAGATTTTTATTGCTGCTGAGCATGCTTTGAAGCAAACCATTTCTAATCCAGAACTGTTGAAATCGTTATCATCATCTGAGGAGTTTGAGCAAAAATATTTAGAGCTAACTAAAGGTGCTGCTGACAATTACCATCGTTCCTGGTGGAAAAGACATGGTGTTGTCCTTGATGGTGAGATAGCAGCTGTTGCTTTTAAGCATGGGAATTTTGATCAAGCTGCAGAATCGTATGAGAAGGTTTGTGCACTGTATGCTGGTGAAGGATGGCAGGATTTGTTGGCTGAGGTCCTTCCCAATTTAGCTGAGTGTCAGAAGATGCTCAATGATCAAGCTGGCTACTTATTATCTTGTGTGAGGTTACTTTCTCTTGATGAAGGATTATTTTTGACCAAGGAGCGCCAAGCCTTTCAGTCAGAAGTCATTCGTCTTGCTCATAGTGAAATGAAGGACCCTGTACCTCTTGATGTATCATCATTAATAACATTTTCTGGAAATCCTGGGCCTCCGTTGGAGTTATGTGATAGGGATCCCGGTATTCTTTCTGTAACTGTATGGAGTGGGTTTCCAGATGATATAACTCTTGATTCAATCAGTCTTACATTAAATGCAACATATAATACTGATGAAGGTGTAAAGGCATTGAAGAGTTCTACAGGTATTGTGTTACACCCTGGTCGGAATACTATTACCTTAGATCTACCACCTCAGAAACCAGGATCTTATGTTCTTGGAGTTCTTACTGGACAGATTGGACAGTTGAGGTTTAGATCTCACAGTTTTTCAAAAGTTGGTCCTGCAGATAGTGATGATTTTATGAGTTATGAAAAGCCAGCTAAACCCATTTTGAAGGTTTTCAAACCTAGAGCTCTTGTTGATCTTGATGCTGCTGTTTCATCTGCTTTGTTGATAAATGAACACCAATGGGTTGGCATTTTAGTTCGACCAGTAAAATACTCCCTCAAAGCTGCTGTCTTGCATATCGATACTGGTCCAGGGTTGGAGATTAAAGAGTCACATGTAATTGAGATGGAAAGCTATGCTGGTGTATCACAGAAAAAAGATGACCAGCTGCAGAATGAAAATTTTGAACGTTTAACTCTTAATGATGGTAAAATAGAATTTCCGAATTGGGCAAGTGTCAATCCTTCTATTCTTTGGGTTATGGTTCGTGCCATCAGTGACACACTCAGCACAGGATCTTCTTCAGCCATAACAAGGAGAGAGAGTATTGTAGATGGAATGAGAACAATAGCTTTGAAACTTGAATTTGGAGCATTCCACAATCAGATGTTTGAAAGGACCCTAGCAGTGCATTTTACATATCCTTTCTATGTGAGGACACGTGTTACTGATAAATGCAATGATGGCACCCTGCTTCTGCAGGTAATACTTCACTCTGAAGTAAAGGCTACACTGACCGTATATGATGCCTGGCTTGATCTTCAAGATGGATTTGTTCATACTGGACAAACTGAGGGTAGAGCTAATTCAAGTTTCTTCCCGCTAATCATATCTCCCACTTCCAAAGCAGGAATTTTGTTTAGTATCTGCCTAGACAAGACTAATGCAGAAGAAGCCAGGAAGCAACCAGAAAGCATATTAAATATCAAATACGGAATTTCTGGTAATAGAACAATTGGGGCCCACCCTCCTGTCATGAATGAATCTACTGGAGTTGATGATGCCAGACAAGAGTTAATCTTCAGGAGTGCAATTACTTTGCAAAGGCCTGTGCTTGATCCTTGCCTAGCTGTTGGTTTTCTTCCTCTACCTTCAGATGGCCTAAGAGTTGGACAACTAATTAAGATGCAATGGAGAGTGGAAAGGTTAAAGGATTTGGATGAGGAAGGAGTTTCTAAACCGGATGATGAGGTGCTATATGAGGTAAACGCAAATTCTGGAAATTGGATGATAGCCGGGAGGAAAAGAGGATATGCATCTCTGTCCACAAAACAAGGCGCAAGAATTATTATCTCAGTATTATGCATGCCACTGGTGGCTGGTTATGTTCGCCCGCCCCTACTAGGGTTGCCAGATGTTGATGAGGCAAATATAAGCTGTAAGCCTGCTGGACCACATCTGGTTTGTGTTTTGCCACCGCCTCTCAGTTCTTCATTCTGCATTCCAGTTAATTCATGA 3741 0.4186 MANFLAQFQTIKTTSDRLVISVEDVSDLWPTVKPAFEGRLPFKRATLNNKTRNPVSVDTLPAEFILTTDSRLRSRFPQEQFLFWFREPYATVVLVTCEDLDEFKTILKPRLKLIVQNDEREWFVVFVSKAHPANDQANKMAKKVYAKLEVEFNTKKRERCCKYDIHLPEANFWEDLESKIMECIRNTLDRRVQFYEDEIRKLSEQRLMPVWNFCNFFILKESLAFMFEMAHLHDDALREYDELELCYLETVNMTGKQRDFGGADHGDDQAALVNPRNKPLTQMVQEDSFREFEFRQYLFACQSKLLFKLNRPIEAATRGYSFIISFSKSLSLHERILPFCMREVWVATACLSLIEATTSNYTDGHVAPDIEKEYFRLLGDLYSLSRLKFMRLAYLIGYGTDIERSPVNSASLSLLPWPKPAVWPSLPADASAEVLEKEKLILQTTSRTKHFGIQRKPLPLEPTVLLREANRRRASLSAGNVSEMFDNRQGPLDGSGFDASTRMSPHKAPANSMSRTNSSPGNFDSSIDRPMRLAEIFIAAEHALKQTISNPELLKSLSSSEEFEQKYLELTKGAADNYHRSWWKRHGVVLDGEIAAVAFKHGNFDQAAESYEKVCALYAGEGWQDLLAEVLPNLAECQKMLNDQAGYLLSCVRLLSLDEGLFLTKERQAFQSEVIRLAHSEMKDPVPLDVSSLITFSGNPGPPLELCDRDPGILSVTVWSGFPDDITLDSISLTLNATYNTDEGVKALKSSTGIVLHPGRNTITLDLPPQKPGSYVLGVLTGQIGQLRFRSHSFSKVGPADSDDFMSYEKPAKPILKVFKPRALVDLDAAVSSALLINEHQWVGILVRPVKYSLKAAVLHIDTGPGLEIKESHVIEMESYAGVSQKKDDQLQNENFERLTLNDGKIEFPNWASVNPSILWVMVRAISDTLSTGSSSAITRRESIVDGMRTIALKLEFGAFHNQMFERTLAVHFTYPFYVRTRVTDKCNDGTLLLQVILHSEVKATLTVYDAWLDLQDGFVHTGQTEGRANSSFFPLIISPTSKAGILFSICLDKTNAEEARKQPESILNIKYGISGNRTIGAHPPVMNESTGVDDARQELIFRSAITLQRPVLDPCLAVGFLPLPSDGLRVGQLIKMQWRVERLKDLDEEGVSKPDDEVLYEVNANSGNWMIAGRKRGYASLSTKQGARIIISVLCMPLVAGYVRPPLLGLPDVDEANISCKPAGPHLVCVLPPPLSSSFCIPVNS 1246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00950 1246 MobiDBLite consensus disorder prediction 505 524 - -
Phco10g00950 1246 MobiDBLite consensus disorder prediction 483 524 - -
Phco10g00950 1246 Coils Coil 185 205 - -
Phco10g00950 1246 Pfam Trafficking protein particle complex subunit 10, TRAPPC10 1128 1205 IPR022233 -
Phco10g00950 1246 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 8 1243 IPR045126 GO:0048193|GO:1990071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00950 10 28079782 28096000 Phco10g00950 10 28079782 28096000 ECH