Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco10g00915 | ATGAATCGGTTGCTGAAAGCGGCCAGAGCCTCTGGTTCTCTCAACCTCTCCAATCGTTCCCTCACAGAAATACCCGACGAGGTTTACCGGAATCTGGAGGGGCTCGGCGGCGGCGGAGGCGACGACAAGTGGTGGGAGGCTGTGGAGCTTCAGAAGCTTATTCTTGCTCACAATAGCATTGGATGGTTGAAGGAAGATCTGAAAAATTTGCCTTTTCTCGCTGTGCTGAATCTCAGCCACAACTGTCTCTCGCAGCTTCCCGCAGCTATAGGAGAGTTGCCTCAGTTGAAAATGTTGGATGTTTCGTTCAATTCGATAATTAAAATACCGGAGGAGATTGGATCGGCTGCATCGCTTGTTAAGCTTGATTGTTCAAATAATAGGCTCACGGAGCTTCCAAGCTCGCTTGGCAGATGCTTAGAATTGTTGGACTTGAAGGGATCAAACAATCTTTTTACAAGCTTGCCAGAAGATTTAGCAAATTGTTCTAAATTGTCTAAGCTGGATATGGAGGGAAACAAGCTAACAGTGATATCGGAAAATCTCATTTCATCATGGACCATGCTTACCGAATTCAATGCATCAAAAAATTTGCTGACTGGGTTTCCAGTCAGCATTGGAGGCCTTTCACGTCTAATTCGTCTTGACCTTCATCAAAATAAAATATCGGCAATCCCTTCATCAATCAATGGTTGTCATTCACTTACAGAGCTTTATTTGGGGAATAACAATATTTCTACCGTACCAGTGGAGATAGCGGCCCTTTCTCGACTTGGAACTTTAGTTCTTCACTCTAACCAGCTGAAGGACTATCCAGTAGAGGCATGCAAATTGAGTCTTTTAGTTTTAGATCTTTCTAATAATTCATTGAGTGGGTTACCCCCTGAAATGGGAAAGATGACTACATTGAGAAAACTTCTGCTTAGTGGAAATCCTTTGAGAACCCTTCGAAGCTCATTAGTATCTGGACCTACACCAGCTTTACTGAAATTTCTACGAAGCAGACTCTCTACAGATGAAGATTCTGAAACTGTAACCACATCAAAAGAAGAGGTGATCGCAATGGCTACCCGATTGTCTATCACTTCAAAGGAACTTTCTATGGAAGGGTTGGGATTAACTGCTGTCCCTTCAGAAGTGTGGGAATCAGGGGAGGTCATAAAACTTGATCTTTCAAGAAACTCCATCCAGGAGTTGCCAGTTCAACTTTCTTCTTGTGTTTCACTCCAGACATTGATTTTATCTAAGAATCAAATTATAGAGTGGCCAAGTTCAATTCTTAAATCACTTTCAAGCCTTTCATGTTTGAAGATAGACAACAATTCCCTCAGACAGATTCCTTTAGATGGCTTTGAAGTGGTGCCTAAGCTTCAGATCCTGGATTTAAGCGGTAATGCAGCTTCATTACTAGATGGTCCTGTATTTTCTTGCTTGCCTTACGTGCAAGAGCTTTACCTAAGAAGAATGAGGCTCAGTGAATTCCCATCTGATATAGTGGGGCTGCATCAGCTACGGATCCTTGACTTGAGTCAGAATTCCCTTCAATCAATTCCAGTGGGGTTAAAGAATCTCACTTCTCTCGAGGAGCTTGACTTATCTGATAACAACATCTCAGTTCTTCCACCTGAGCTGGGTTTGCTGGAACCAAGCCTACAGGCGTTGAGACTTGATGGGAATCCTCTCAGAAGCATTCGAAGGACTGTCTTGTCTAAAGGAACTAAAGCTGTTTTGAACTATTTGAAGGACAAATTGCCAGAGTAG | 1761 | 0.4287 | MNRLLKAARASGSLNLSNRSLTEIPDEVYRNLEGLGGGGGDDKWWEAVELQKLILAHNSIGWLKEDLKNLPFLAVLNLSHNCLSQLPAAIGELPQLKMLDVSFNSIIKIPEEIGSAASLVKLDCSNNRLTELPSSLGRCLELLDLKGSNNLFTSLPEDLANCSKLSKLDMEGNKLTVISENLISSWTMLTEFNASKNLLTGFPVSIGGLSRLIRLDLHQNKISAIPSSINGCHSLTELYLGNNNISTVPVEIAALSRLGTLVLHSNQLKDYPVEACKLSLLVLDLSNNSLSGLPPEMGKMTTLRKLLLSGNPLRTLRSSLVSGPTPALLKFLRSRLSTDEDSETVTTSKEEVIAMATRLSITSKELSMEGLGLTAVPSEVWESGEVIKLDLSRNSIQELPVQLSSCVSLQTLILSKNQIIEWPSSILKSLSSLSCLKIDNNSLRQIPLDGFEVVPKLQILDLSGNAASLLDGPVFSCLPYVQELYLRRMRLSEFPSDIVGLHQLRILDLSQNSLQSIPVGLKNLTSLEELDLSDNNISVLPPELGLLEPSLQALRLDGNPLRSIRRTVLSKGTKAVLNYLKDKLPE | 586 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco10g00915 | 586 | ProSiteProfiles | Leucine-rich repeat profile. | 279 | 300 | IPR001611 | GO:0005515 | |
| Phco10g00915 | 586 | ProSiteProfiles | Leucine-rich repeat profile. | 526 | 547 | IPR001611 | GO:0005515 | |
| Phco10g00915 | 586 | ProSiteProfiles | Leucine-rich repeat profile. | 234 | 255 | IPR001611 | GO:0005515 | |
| Phco10g00915 | 586 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING | 187 | 319 | - | - | |
| Phco10g00915 | 586 | FunFam | Leucine-rich repeat-containing protein 40 | 474 | 583 | - | - | |
| Phco10g00915 | 586 | Pfam | Leucine Rich Repeat | 280 | 295 | IPR001611 | GO:0005515 | |
| Phco10g00915 | 586 | SMART | LRR_bac_2 | 70 | 89 | - | - | |
| Phco10g00915 | 586 | SMART | LRR_bac_2 | 116 | 135 | - | - | |
| Phco10g00915 | 586 | SMART | LRR_bac_2 | 277 | 297 | - | - | |
| Phco10g00915 | 586 | SMART | LRR_bac_2 | 501 | 520 | - | - | |
| Phco10g00915 | 586 | SMART | LRR_bac_2 | 524 | 544 | - | - | |
| Phco10g00915 | 586 | SMART | LRR_bac_2 | 189 | 205 | - | - | |
| Phco10g00915 | 586 | SMART | LRR_bac_2 | 162 | 181 | - | - | |
| Phco10g00915 | 586 | SMART | LRR_bac_2 | 383 | 402 | - | - | |
| Phco10g00915 | 586 | SMART | LRR_bac_2 | 93 | 112 | - | - | |
| Phco10g00915 | 586 | SMART | LRR_bac_2 | 232 | 251 | - | - | |
| Phco10g00915 | 586 | Gene3D | Ribonuclease Inhibitor | 274 | 331 | IPR032675 | - | |
| Phco10g00915 | 586 | Gene3D | Ribonuclease Inhibitor | 470 | 583 | IPR032675 | - | |
| Phco10g00915 | 586 | Gene3D | Ribonuclease Inhibitor | 180 | 273 | IPR032675 | - | |
| Phco10g00915 | 586 | Pfam | Leucine rich repeat | 211 | 268 | IPR001611 | GO:0005515 | |
| Phco10g00915 | 586 | Pfam | Leucine rich repeat | 432 | 488 | IPR001611 | GO:0005515 | |
| Phco10g00915 | 586 | Pfam | Leucine rich repeat | 503 | 561 | IPR001611 | GO:0005515 | |
| Phco10g00915 | 586 | Pfam | Leucine rich repeat | 49 | 106 | IPR001611 | GO:0005515 | |
| Phco10g00915 | 586 | SMART | LRR_typ_2 | 300 | 323 | IPR003591 | - | |
| Phco10g00915 | 586 | SMART | LRR_typ_2 | 407 | 429 | IPR003591 | - | |
| Phco10g00915 | 586 | SMART | LRR_typ_2 | 255 | 278 | IPR003591 | - | |
| Phco10g00915 | 586 | SMART | LRR_typ_2 | 549 | 571 | IPR003591 | - | |
| Phco10g00915 | 586 | SMART | LRR_typ_2 | 430 | 453 | IPR003591 | - | |
| Phco10g00915 | 586 | SMART | LRR_typ_2 | 93 | 116 | IPR003591 | - | |
| Phco10g00915 | 586 | SMART | LRR_typ_2 | 162 | 185 | IPR003591 | - | |
| Phco10g00915 | 586 | SMART | LRR_typ_2 | 501 | 523 | IPR003591 | - | |
| Phco10g00915 | 586 | SMART | LRR_typ_2 | 279 | 299 | IPR003591 | - | |
| Phco10g00915 | 586 | SMART | LRR_typ_2 | 117 | 139 | IPR003591 | - | |
| Phco10g00915 | 586 | SMART | LRR_typ_2 | 524 | 547 | IPR003591 | - | |
| Phco10g00915 | 586 | SMART | LRR_typ_2 | 209 | 232 | IPR003591 | - | |
| Phco10g00915 | 586 | SMART | LRR_typ_2 | 454 | 477 | IPR003591 | - | |
| Phco10g00915 | 586 | SMART | LRR_typ_2 | 233 | 254 | IPR003591 | - | |
| Phco10g00915 | 586 | SMART | LRR_typ_2 | 384 | 406 | IPR003591 | - | |
| Phco10g00915 | 586 | SMART | LRR_typ_2 | 70 | 91 | IPR003591 | - | |
| Phco10g00915 | 586 | SMART | LRR_sd22_2 | 209 | 231 | - | - | |
| Phco10g00915 | 586 | SMART | LRR_sd22_2 | 524 | 539 | - | - | |
| Phco10g00915 | 586 | SMART | LRR_sd22_2 | 162 | 184 | - | - | |
| Phco10g00915 | 586 | SMART | LRR_sd22_2 | 232 | 254 | - | - | |
| Phco10g00915 | 586 | SMART | LRR_sd22_2 | 406 | 435 | - | - | |
| Phco10g00915 | 586 | SMART | LRR_sd22_2 | 501 | 523 | - | - | |
| Phco10g00915 | 586 | SMART | LRR_sd22_2 | 93 | 115 | - | - | |
| Phco10g00915 | 586 | SUPERFAMILY | L domain-like | 44 | 320 | - | - | |
| Phco10g00915 | 586 | SUPERFAMILY | L domain-like | 364 | 562 | - | - | |
| Phco10g00915 | 586 | ProSiteProfiles | Leucine-rich repeat profile. | 503 | 525 | IPR001611 | GO:0005515 | |
| Phco10g00915 | 586 | Gene3D | Ribonuclease Inhibitor | 9 | 179 | IPR032675 | - | |
| Phco10g00915 | 586 | Gene3D | Ribonuclease Inhibitor | 332 | 469 | IPR032675 | - | |
| Phco10g00915 | 586 | PRINTS | Leucine-rich repeat signature | 524 | 537 | - | - | |
| Phco10g00915 | 586 | PRINTS | Leucine-rich repeat signature | 280 | 293 | - | - |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phco10g00915 | 10 | 26634270 | 26642230 | Phco10g00915 | 10 | 26634270 | 26642230 | ECH |