Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00910 ATGGCGAAGAAGCAAGAGAAGAAAGTGAACGTCTCCGGCAAACCGAAGCACTCTCTCGACGTTAACCGCAGCAATGACTCGAAGAAGGAGAGGCGCTCCGCCGCCACCGTGCGCCGCCTCAAGATGTACAAGACCAGGCCCGTTCGCGACCGAAAAGGCAAAGTCCTCTCCAACGAGTTTCAGTCCAAGGATCTTCCCAGCACACGAATTCAACCTGATCGCCGATGGTTCGGGAATACGCGTGTTGTGAATCAGAAGGAGCTCGAGTTCTTCCGGGAAGAGCTGCAGAGTCGCATGTCCAGTAATTACAATGTGATTCTTAAAGAGAAGAAACCTGCCGCTCAAGTTAGAGTTCATCTGCTTGATAGAGAGCCTTTTCTAGATGCTTTTGGACCTAAGACCAAAAGAAAGCGCCCCAGCCTCTTGGCTGCTGACTACGAGTCCTTGCTGAAGAAAGCTGATGGTTCTCAAGATGTTTTTGAACAGAAGCGTGGTTCTAGTGCATCTGGAGAAGCTGATGATGGGGATGGATTTAGAGATTTAGTGCGACATACCATGTTCGAAAAGGGTCAAAGTAAACGCATATGGGGCGAGCTTTACAAAGTGATAGATTCATCTGATGTTGTTGTACAGGTTCTAGATGCGAGGGATCCACAAGGTACAAGATGTTACCATTTAGAGAAGCATTTGAAGGAAAATTGTAAGCACAAACACATGGTGCTTTTATTGAACAAGTGTGATCTAGTTCCTGCTTGGGCAACAAAAGGATGGCTTAGAGTTTTGTCTAAAGAATTTCCAACTCTGGCATTCCATGCAAACATTAACAAGTCTTTTGGAAAAGGTTCTCTTCTATCTGTACTTAGACCATTTGCACGTTTGAAACGGGATAAGCAAGCAATATCTGTTGGATTTGTTGGATATCCAAATGTTGGGAAGTCATCAATAATCAACACTTTGCGTACAAAGAATGTCTGCAAGGTTGCTCCAATTCCAGGGGAAACGAAAGTCTGGCAGTATATAACGCTTACAAAGAGAATCTTTTTGATTGATTGTCCAGGTGTAGTCTACCACAACAAGGATTCTGAAACAGATGTTGTGTTAAAGGGTGTGGGATATGGTTTAATGCAATCTAATCAGCCTAGTTGTCTCCTATGA 1155 0.4442 MAKKQEKKVNVSGKPKHSLDVNRSNDSKKERRSAATVRRLKMYKTRPVRDRKGKVLSNEFQSKDLPSTRIQPDRRWFGNTRVVNQKELEFFREELQSRMSSNYNVILKEKKPAAQVRVHLLDREPFLDAFGPKTKRKRPSLLAADYESLLKKADGSQDVFEQKRGSSASGEADDGDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKENCKHKHMVLLLNKCDLVPAWATKGWLRVLSKEFPTLAFHANINKSFGKGSLLSVLRPFARLKRDKQAISVGFVGYPNVGKSSIINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYHNKDSETDVVLKGVGYGLMQSNQPSCLL 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00910 384 MobiDBLite consensus disorder prediction 1 37 - -
Phco10g00910 384 MobiDBLite consensus disorder prediction 1 42 - -
Phco10g00910 384 Pfam 50S ribosome-binding GTPase 302 359 IPR006073 GO:0005525
Phco10g00910 384 Pfam NGP1NT (NUC091) domain 42 158 IPR012971 -
Phco10g00910 384 FunFam Nuclear/nucleolar GTPase 2 195 357 - -
Phco10g00910 384 Gene3D - 186 356 IPR027417 -
Phco10g00910 384 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 196 357 IPR030378 GO:0005525
Phco10g00910 384 CDD NGP_1 198 354 IPR024929 GO:0005730
Phco10g00910 384 PRINTS GTP1/OBG GTP-binding protein family signature 348 363 IPR006073 GO:0005525
Phco10g00910 384 PRINTS GTP1/OBG GTP-binding protein family signature 302 322 IPR006073 GO:0005525
Phco10g00910 384 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 192 362 IPR027417 -
Phco10g00910 384 PANTHER GTP-BINDING PROTEIN-RELATED 28 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00910 Phco-Chr10 26177683 26180608 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00910 10 26177683 26180608 Phco10g00910 10 26177683 26180608 ECH