LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco10g00706	ATGGTCTTTTTTCTTCCTGAGGAAAAGGGTAAAAAAGGGCTGAAGTTGGTCCAGCTGTTAAAGTCAATGAAATTTTGTTACAAAGCGGCACACTTGCTTGCTCCAGTTGCTGCAAAAGCTGAGTATGGATACTATGTTAGTGATTCATTTCAATTGATTCACGTGATTCATGGCCTGATTCATGCCCAAAAACGAGTTAGGATCCGATTTGAATCAATAAGGTCCTATTTTGACTCGAATCGCGATTTGTATTGTACGAATAAGGTTCTTGTGGCTTTTGGAGAAGGCATCCATCTCTACAGACTGTTCAGAAGGTTGTATAAGGGGCTCAAAGCTGGTCCAGTTGTAAAAGTTAAGGAGCTTATGCAGACTAAGTTTTGGCTGGGCTTGTGTTGTGGGGCTTGCCTAATATTGGGAGCATGGAATGGGAATGGAGTTTTTAGTTTATGTTTGATGGGCAATCTCACTCTCCCATGCATAGCTGTAACACCTGTTACATGTCGTATTCCTTCTAAATTTGTAACTGTAGCTGTGATGCAATTGGTTGAAGCTGTTATGTGTTTGAAAATGGAGGATGGGAGAGTTTACACAATATCTGGGCAAATACAGGACCTCTCAGTTTCATCACCAGCTCTTGAACATAGCAAAGCTTGTGTTGGGATAATGCAAAGTGTCTCTAGTTTGTTATCAATGGAAGTTGATCTGTTAGACACAGAACCCGGGACCATTAATGAAGGTTCCATAGTGAAGAAATCAAAGCAGCGTAAGAGGAAGAATTTCACTGTGGATGAGGAAGGGCAAATGGGGTCGCGAGAGAAGCTGGCAAAAAGAATCTTATTGTCTCTTACGAGGCCTTCCTATGTCATGGGATTGGGTCCCAAACCTCTAAGGAAGGAACACCGTACAAGATTGCACTACCTGCTGCGGAGGCTCGTCAACCAGCACCACTGGGTTGCAGCCAGTGGTGTTCTCAGTGCCTACATGAAGGGCACACTTAATGACACCTCTCCCTTCAGAAATCGTCTTAAGTTTTGGGTTTTAATGGAGCTTCTTAAGCATATGAAAAATAATTCTATTAATCCCACAAGAATTAAGAATCTCTATGATATTTGGTGGAAGAAAATTGGATCAATGAAGACTTGGCCTTTACAGGTAGTAACTGTTTCTGACTTACAGCTTGTTCTGAAGTGCCTAAAGCTACCCATCAAGTACTCAACAAATAATACTTTTCTTTTCCTCCTTTGCCTTGGTGGAATTCGGACTAATTTGAAGGGATCAGGAGACACCCTCCCTCAAGTCTTTGTTCTTCTTGGCCACATATTGTTGATTAACCAGATTGGTTTTGTTTCCTTGATCAACGACAACAACAGGATTGCACCTTCTGCAATTAGCAATAAGATGACAATAAGACTAGGCATTGCCTCCAAACTGTCTGAAGTTTTGTCATCAGGGGATGCATACCAGCTTGCTTTGTGCATTGAGCAAGAAAGGGTTGATATTCATCCTGTGTTAAAGATGATGATGGGTTTGACATTCTATGAGCTGTGGTATTCTTCTATCCCCAAAGAATTCCAGTGGAGAAACTCAGACCAGTTTGACTTGCAAGAGAACTCAAATATGGAGGAGACCTCATTTACCAATAAAACTGGACAGTCAGAGCAGTATAATTCAGTTGAATCCCATATGGCTGACTCCCACTGTCAACGTGATTCAGATGCCTCTATCATGAATAACAAGCATATATCTAGGGATGTAATATTCAATGAAGACATGGAGGTTGATACTAATAAAAGAGAAAATCCACATCAGAACTTTCAGCCAGAAGGTTTTTACTTAAATTCTGAAGAGCAAAAAGGATATAGAGACCCTTTTTCTAACAGTGGAGGTCTTACACAGGATATCTTATATGGTCTTGGTAAGATGGGCCGCTTTAGGAATATCTATCTCTATAGGCCTCCATTAGATGAATCATTTTATGAGACAGAGGCTTACTCTTTCTGTGGTTATGATGTAGCAGAGAGGTTTCCCAGAGAAATCCAAGAAGCCCAATGCAGAGTACCAGTTTTTATCAAATTGGTTTTTGAACTTATTGCTCATCGTTTCTTGGTTTTGATAGCGATTACTCTCTGGTTCACTATTAACTTCAATATTGTCTTTTTGTGCATTTACGTAGGGGGACTTGATTTGTGGTTGTTGCCCTTGAATTTTTCTGATGAGAGAAATTTTGAGGAGTTCATGTATGTGCAAAGAAATCAGCCTAATGCCTATTATGAAAATTCAGTGAAATATTTACAACTATCTCTCAACTCAGAACCTTCTGCTTCAGCAGCATTACTCCCATTGGTACAGGAAAAGGATGTGTTAGAGTGCTTTCCTTTCAAAGGATATCCTTACGATTGTACAACTGTCCAGTTTCTTGCTTGCATGTTAATGTACAGGGCTTCACTTTATTGCCAGCTGTTGCTAATTGGAGGACAAGTTGACGAGGCTCTAAATATGCTTGAGAAGCAGTGCTGTAATACAGCCTCTGTGCTCCCACTAAGAGTGAGGGCAGCTCTCTTGGAGCGTTTTGATCGAAACAACTCTGTCGTGCTTCTTAGCTGTTTAGAGAATATATTAAAGAAGGATCCAACTTGTAGTGATGCCTTAGCTAAACTTATCAAGATGCACCAAAATGGAGAGTACAGGCTTGACTCTCTGCTGGAAATGATTGCTTTACATTTAGATGTTACAGATTCAGAACACAATACGTGGAAGGTCTTCTCTTCATGCTTCTTAAGACTGTTTTCCTACGAAGAAGACTGTATGTCTTCATGTCCCATTCAAACTGAATATGGACACAAGCAACATCGTTCCTTTTACAAAACCCCTAAAATATTTTGGGATGGTACATCTGGAAAATCTTGGTATCTTCGTTGTAGGTGGTGGATAACAAGACATTTCAGCAATAGCAAGCTTGAATCAGAGATTAAATCAGGTGATTTGCAGTTACTGACATGCAAAGCAGCATGTGCATCGTATATGTATGGACGTGAGTTCAGCTATGTTGAGAAGGTTTTTTCTCATTTAGAGAAAGAAAATGATAAGGAGTTGTTGTTGTTCTTGGATGAGCACAGGGGAAATTCTTTAGGAATTTATAAAAAAATTCGTAAGAAATTACACACATAA	3168	0.3996	MVFFLPEEKGKKGLKLVQLLKSMKFCYKAAHLLAPVAAKAEYGYYVSDSFQLIHVIHGLIHAQKRVRIRFESIRSYFDSNRDLYCTNKVLVAFGEGIHLYRLFRRLYKGLKAGPVVKVKELMQTKFWLGLCCGACLILGAWNGNGVFSLCLMGNLTLPCIAVTPVTCRIPSKFVTVAVMQLVEAVMCLKMEDGRVYTISGQIQDLSVSSPALEHSKACVGIMQSVSSLLSMEVDLLDTEPGTINEGSIVKKSKQRKRKNFTVDEEGQMGSREKLAKRILLSLTRPSYVMGLGPKPLRKEHRTRLHYLLRRLVNQHHWVAASGVLSAYMKGTLNDTSPFRNRLKFWVLMELLKHMKNNSINPTRIKNLYDIWWKKIGSMKTWPLQVVTVSDLQLVLKCLKLPIKYSTNNTFLFLLCLGGIRTNLKGSGDTLPQVFVLLGHILLINQIGFVSLINDNNRIAPSAISNKMTIRLGIASKLSEVLSSGDAYQLALCIEQERVDIHPVLKMMMGLTFYELWYSSIPKEFQWRNSDQFDLQENSNMEETSFTNKTGQSEQYNSVESHMADSHCQRDSDASIMNNKHISRDVIFNEDMEVDTNKRENPHQNFQPEGFYLNSEEQKGYRDPFSNSGGLTQDILYGLGKMGRFRNIYLYRPPLDESFYETEAYSFCGYDVAERFPREIQEAQCRVPVFIKLVFELIAHRFLVLIAITLWFTINFNIVFLCIYVGGLDLWLLPLNFSDERNFEEFMYVQRNQPNAYYENSVKYLQLSLNSEPSASAALLPLVQEKDVLECFPFKGYPYDCTTVQFLACMLMYRASLYCQLLLIGGQVDEALNMLEKQCCNTASVLPLRVRAALLERFDRNNSVVLLSCLENILKKDPTCSDALAKLIKMHQNGEYRLDSLLEMIALHLDVTDSEHNTWKVFSSCFLRLFSYEEDCMSSCPIQTEYGHKQHRSFYKTPKIFWDGTSGKSWYLRCRWWITRHFSNSKLESEIKSGDLQLLTCKAACASYMYGREFSYVEKVFSHLEKENDKELLLFLDEHRGNSLGIYKKIRKKLHT	1055

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco10g00706	1055	PANTHER	TAF RNA POLYMERASE I SUBUNIT A	720	783	-	-
	Phco10g00706	1055	Pfam	TAF RNA Polymerase I subunit A	817	1019	IPR039495	GO:0000120\|GO:0006360
	Phco10g00706	1055	Pfam	TAF RNA Polymerase I subunit A	474	783	IPR039495	GO:0000120\|GO:0006360
	Phco10g00706	1055	Pfam	TAF RNA Polymerase I subunit A	311	398	IPR039495	GO:0000120\|GO:0006360

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco10g00706	Phco-Chr10	8571863	8590057	Dispersed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phco10g00706	10	8571863	8590057	Phco10g00706	10	8571863	8590057	ECH