Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00692 ATGATTAACAATGGAGTCTGCACTCTCCGCACCTGCTTCCGTTTTCCAGAGAGGTCGCTATTCCGACCACGGCAGTGCTCGTTCACTTCCCGGCGACGGTTTCTGGTGACTGCATCCGAAAGGAAGAAGAAAGAGAAGGTGATTGTGATTTCTGGACCCACCGGTTCGGGCAAGAGCCGCCTGGCATTGGAACTAGCTAAGCGCCTAAACGGCGAAATCGTCAGTGCTGACTCCGTTCAGGTGTATCGGGGGCTTGATGTTGGATCTGCAAAGCCTTCCCCAGATGAAAGAAAGGAGGTACCGCATCATCTGGTTGACATACTGCACCCATCTGAAGACTATTCTGTTGGGCAGTTTTTCGAGGATGCAAGGCATGCTACAAGATGTATTCTTGACAATGGCCGTGTTCCCATAGTTGTTGGAGGCACTGGATTGTATTTAAGATGGTTCATATATGGAAAGCCAGATGTACCTAAAGCTTCTCCAGATATTATATCTGAAGTAAATCAAGAATTAGCTGAACTACAGAGGAGAGATGACTGGGATACAGCTGTACAGTTGGTGGTAAAAGCAGGTGATCCAAAGGCTCAATTTCTAGCAGTGAATGATTGGTATCGATTACGGCGTAGCCTAGAGATTATTAAGTCTAGTGGATCACCTCCTTCTGCGTTTCGGGTACCATATGATTCTTTCAGGGAACATAGTGAATGTAGCGTTGCTGAGGTTTCGGAGTCATCTGATATGAACACTGGAATGGAAGAAACCAGCTCATCAGAGTTAGACTATGAGTTTATGTGCTTTTTCCTTTCTAGTCATAGACTTGACCTCTATAAATCAATTGATTATCGGTGTGAAGATATGCTTTTAGGAAGGGATGGGATTTTGTCCGAGGCTCACTGGCTTCTTGATACGGGTCTTCATCCAAACTCCAATTCTGCAACTAAAGCAATTGGTTACAGACAAGCCATGGAGTACTTACAAAGATGCAGAGAGCACGGGGGTCAGAGTTCTGTTGCAGAATTTTACAAATTCTTGTTTGAATTTCAAAAAGCATCGCGGAATTTCGCAAAAAGGCAGTTGACATGGTTTCGTAATGAAAACATATACCAGTGGCTTGATGCTTCTAAACCTCTGGAAACCATTCTCAGTTTCATTAATGGCGCATACCATGACTGGAATGGAAGTCTTCTTGTGCCTGAACACCTAAGAATGTCGAGAGATATTTCTAATCGCCGAGAAGCTACACAACTAAAGTCTTATCGCACCAAAAATAGGCATTTTGTGAAGGGAGAAGATTGTTCTCATATTCTTAACTGGATAAGCAAGACACAAAGGTGA 1338 0.4395 MINNGVCTLRTCFRFPERSLFRPRQCSFTSRRRFLVTASERKKKEKVIVISGPTGSGKSRLALELAKRLNGEIVSADSVQVYRGLDVGSAKPSPDERKEVPHHLVDILHPSEDYSVGQFFEDARHATRCILDNGRVPIVVGGTGLYLRWFIYGKPDVPKASPDIISEVNQELAELQRRDDWDTAVQLVVKAGDPKAQFLAVNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFREHSECSVAEVSESSDMNTGMEETSSSELDYEFMCFFLSSHRLDLYKSIDYRCEDMLLGRDGILSEAHWLLDTGLHPNSNSATKAIGYRQAMEYLQRCREHGGQSSVAEFYKFLFEFQKASRNFAKRQLTWFRNENIYQWLDASKPLETILSFINGAYHDWNGSLLVPEHLRMSRDISNRREATQLKSYRTKNRHFVKGEDCSHILNWISKTQR 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00692 445 Hamap tRNA dimethylallyltransferase [miaA]. 47 383 IPR018022 GO:0008033
Phco10g00692 445 FunFam tRNA dimethylallyltransferase 9 155 226 - -
Phco10g00692 445 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 176 IPR027417 -
Phco10g00692 445 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 44 375 IPR039657 -
Phco10g00692 445 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 355 IPR027417 -
Phco10g00692 445 Gene3D - 44 435 IPR027417 -
Phco10g00692 445 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 47 224 IPR018022 GO:0008033
Phco10g00692 445 Pfam IPP transferase 80 366 - -
Phco10g00692 445 Gene3D - 155 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00692 Phco-Chr10 8240874 8247041 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00692 10 8240874 8247041 Phco10g00692 10 8240874 8247041 ECH