Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00688 ATGGACAAATTCATTACGAAGGGACATCTGAAGAAGAAGGGCAAAAAGAAGGCACAAATGGCATTGCGTCAGATACCATTCTTCCCTCACACACTTTCTCTCACTCTCATTTCCAAACCCAAACTCAACAACAATAACAACAATCGTTTCTCCTTCTTCACTCCCTCACTCTCTTCCACTGCTCTCATGGCCACTTCTCACAACGTCTTGCTTCCAATCGCCCCCGGCTCCGAGCCCATGGAGGCCGTCATCATAGTCGACGTCCTCCGCCGCGCCGGCGCCGACGTCACAGTCGCCTCTGACTCCGCCAACCTCTCCGTCCTTGCTCGCCACGATGTCAAGATCCTCGCAGACGCCTCCGTCTCCGATGTCGCCGGCACCTCCTTTGACCTCGTCGCAATCCCTGGAGGGATACCGGGTGTTGAAAATCTGAGGGACTGTAAGGTTTTGGAAGGATTGGTGAAGAAGCATGTGGAGGAAGGACGGCTTTATGCTGCGGTGTGTGCTGCTCCTGCGGTAGTGCTTGGACCTTGGGGTTTGCTGAATGGATTGAAGGCAACTGGTTTTCCTGCACTGATGGAGAAATTGGCCTCTTACGCAGCCACTACTGTCGAATCTAGGGTGCAGGTGGATGGCAGAGCAGTGACCAGCCGAGCTCCGGGAACTACCATGGAGTTTGCTCTTGCGCTGATTGAGCAGTTACTTGGAAAAGAGAAAGCAGATGAAGTTGCTGGCCCACTGGTCATGCGTTCCAATCATGATGATGAACATACTTTCAAGGAGTTTAACCCAGTGCAGTGGACATTTGACAATCCACCCCGGATTCTTGTACCAATTGCTAATGGTTCAGAGGAAATGGAAGCTGTGATCATCATTGATATGCTGCGAAGAGCAAAGGCAAATGTTGTGGTTGCTTCTGTTGAGGATAAACTAGAGATTGTGGCATCACGCAAAGTTAAACTGGAGGCAGACATGCTCCTTGACGAAGCAGCCAAACTTTCATATGACCTTATTGTGTTACCTGGTGGACTTGGTGGTGCCCAAACATTTGCAAACTCAGAAACCTTGGTGAATTTGCTGAAAAAACAAAGAGAATCTAACAAATATTATGGAGCAATTTGTGCATCCCCGGCCTTAGTCTTGGAGCCCCATGGTTTGCTTAAGGGTAAAAAGGCCACTGCCTTTCCTGCAATGTGCAACAAGTTATCTGATCAGAGTGAAGTAGACAACAGGGTGGTAGTTGATGGGAATTTCATTACCAGTAGAGGCCCAGGAACCTCCATTGAGTTTGCATTAGCTATTGTGGAGAAGCTGTTTGGACGCAAGTTAGCCCTAGAACTTGCAAAGGCAGTAGTGTTCGGGCGCCCGTAG 1371 0.4945 MDKFITKGHLKKKGKKKAQMALRQIPFFPHTLSLTLISKPKLNNNNNNRFSFFTPSLSSTALMATSHNVLLPIAPGSEPMEAVIIVDVLRRAGADVTVASDSANLSVLARHDVKILADASVSDVAGTSFDLVAIPGGIPGVENLRDCKVLEGLVKKHVEEGRLYAAVCAAPAVVLGPWGLLNGLKATGFPALMEKLASYAATTVESRVQVDGRAVTSRAPGTTMEFALALIEQLLGKEKADEVAGPLVMRSNHDDEHTFKEFNPVQWTFDNPPRILVPIANGSEEMEAVIIIDMLRRAKANVVVASVEDKLEIVASRKVKLEADMLLDEAAKLSYDLIVLPGGLGGAQTFANSETLVNLLKKQRESNKYYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSEVDNRVVVDGNFITSRGPGTSIEFALAIVEKLFGRKLALELAKAVVFGRP 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00688 456 CDD GATase1_DJ-1 69 234 - -
Phco10g00688 456 SUPERFAMILY Class I glutamine amidotransferase-like 67 254 IPR029062 -
Phco10g00688 456 FunFam Protein DJ-1 homolog C 61 252 - -
Phco10g00688 456 FunFam Protein DJ-1 homolog C 267 456 - -
Phco10g00688 456 SUPERFAMILY Class I glutamine amidotransferase-like 272 453 IPR029062 -
Phco10g00688 456 Gene3D - 269 455 IPR029062 -
Phco10g00688 456 Gene3D - 61 262 IPR029062 -
Phco10g00688 456 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 67 247 - -
Phco10g00688 456 Pfam DJ-1/PfpI family 274 436 IPR002818 -
Phco10g00688 456 Pfam DJ-1/PfpI family 68 233 IPR002818 -
Phco10g00688 456 NCBIfam DJ-1 family protein 69 245 IPR006287 -
Phco10g00688 456 NCBIfam DJ-1 family protein 274 449 IPR006287 -
Phco10g00688 456 CDD GATase1_DJ-1 275 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00688 Phco-Chr10 8206983 8210836 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00688 10 8206983 8210836 Phco10g00688 10 8206983 8210836 ECH