Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00678 ATGGCTACCTTCTCCAAGGAACGCGACAACTTTGTATATGCTGCCAAGTTAGCTGAACAAGCTGAACGATATGATGAAATGGTGGATGCGATGAAGAAGGTGGCGAAGTTGGACGTCGAGCTGAGTGTGGAAGAGAGGAACTTGTTCTCTGTTGGATACAAAAATGTGGTGGGGTCACGGAGAGCTTCATGGAGGATCTTGTCATCGATAGAGCAGAAAGAGGAGTCAAAAGGGAATGAGTTGAATGTTAGGCGCATCAGGGATTATAGGCACAAGGTGGAGTTGGAGCTGTCTAACATTTGCAGTGACATTATGATAATTTTAGATGAGCATCTTATTCCATCCACTAATATTGCGGAGTCCACAGTGTTTTATTATAAGATGAAAGGAGACTATTACCGGTATTTGGCAGAATTCAAAGCTGGTAACGAAAAGAAAGAGGTAGCAGATCAGTCACTTAAAGCATATCAGACAGCTGCTACCACTGCTGAGAGTGAATTACAACCTACACATCCTATTCGTTTGGGTCTGGCTCTAAATTTCTCTGTGTTTTATTATGAGATAATGAATTCACCTGAAAGGGCCTGCCATCTTGCTAAGCAAGCCTTTGATGATGCTGTCTCAGAGCTAGATACCCTGAATGAGGAATCTTACAAGGATGGCACCTTGATCTTGCAGCTGTTGAGGGATAACCTTACCTTATGGACTTCTGACATCCCCGAAGAGGGTGAGGACCAAAAAATGGATGACACAGCAAGGAATGGTCAAGGAGAAGATGAGTTAGGCCGCTAA 792 0.4369 MATFSKERDNFVYAAKLAEQAERYDEMVDAMKKVAKLDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNELNVRRIRDYRHKVELELSNICSDIMIILDEHLIPSTNIAESTVFYYKMKGDYYRYLAEFKAGNEKKEVADQSLKAYQTAATTAESELQPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDDAVSELDTLNEESYKDGTLILQLLRDNLTLWTSDIPEEGEDQKMDDTARNGQGEDELGR 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00678 263 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Phco10g00678 263 MobiDBLite consensus disorder prediction 239 263 - -
Phco10g00678 263 SMART 1433_4 8 249 IPR023410 -
Phco10g00678 263 FunFam 14-3-3 protein epsilon 3 249 - -
Phco10g00678 263 PANTHER 14-3-3 PROTEIN 8 239 IPR000308 -
Phco10g00678 263 MobiDBLite consensus disorder prediction 240 263 - -
Phco10g00678 263 PIRSF 14-3-3 2 250 IPR000308 -
Phco10g00678 263 Pfam 14-3-3 protein 15 236 IPR023410 -
Phco10g00678 263 Coils Coil 14 34 - -
Phco10g00678 263 Gene3D - 2 250 IPR036815 -
Phco10g00678 263 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Phco10g00678 263 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Phco10g00678 263 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Phco10g00678 263 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Phco10g00678 263 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Phco10g00678 263 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Phco10g00678 263 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00678 Phco-Chr10 8048762 8052772 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00678 10 8048762 8052772 Phco10g00678 10 8048762 8052772 ECH