Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00672 ATGCACAACAAAACATATCCATCAGTTACAACGATAGCTTCTATGCCTCAATCCAAAACTTCCCTTCCTAGCTTCTTCTTCTTCTTCTTCTCCACCTCCTTTACCATCATTCACGCTATTGTTCCTCAAAATGAGACCTTCAAATTCGAAAACTCAGGTGAATTTGGACCCTACATTACCGAGTATGATGCTAGTTACCGGATGCAAGACATTTTCAGCTCTCCTTTCCAAGTTGCATTCTACAACACCACCCCAAATGCCTTCACTCTAGCTTTGCGCATGGGACTTCGACGCTCAGAGCAACTTTTTCGTTGGGTGTGGGAGGCCAATAGAGGCAACCCAGTTGGAGAGAATGCCACTTTTTCGCTTGGCACTGATGGCAACCTTGTGTTGGCTGAAGCTGATGGTAGAATCGCTTGGCAAACCAACACTGCCAACAAGGGTGTTGTGGCCTTCAAGTTACTTCCAAATGGGAACATGGTCCTCCTTGATGCACAAGGAAAGTTTGTTTGGCAAAGTTTTGACTACCCCACGGATACCCTTTTGATTGACCAATATCTAAGAGCAAAAGGGCCATCCAAGTTGGTTAGTAGGCTTTCAGAGAGGGATAATGTAGATGGTCCTTATAGTTTGGTTTTGGAGCCTAAAAGGTTGGCCTTGTACTACAAGAGCAAGAATTCTCCTAGACCAATTCTTTATTGGTATAGGATCTTCACTCAACAAGGTTCAGTGGAAAATATCACCCTCACATCTTATCCAGACACTTTTGAAATTGAATTCACCTATGCGCTTAGTTCTTCCACCAGTGACTACAGAACCATGGCGGAACCATTGAACAACATTCCCGTTGGAGTCTTGGGAATGCCAGTGAACAACAGCACCTTGACATACCTTAGGCTTGGAATTGATGGAAATATTAGGCTGCACACTTACTTCCTCAATGTGCGTTCTGGTGTTTGGGAAGTGACCTACACTCTCTTTGACAGAGATTCTCATGATGAGAGTGAGTGCCAATGGCCTGAGAAGTGTGGGAATCTTGGGCTATGTCAGAATGAGCAATGTGTGGCTTGTCCATTGGAAAATGGACTATTTGGATGGAGCAACAACTGCACTGCCAAGCCTGTGACATCATGCAAGGCAAGTGATTTCCACTACTACAAAGTTGAAGGAGTTAGACATTACATGAGCAAATACACTGAGGGAAGTAAAGTGAGTGAAAGTACTTGCGGAAACAAATGCACTAAGGATTGCAAGTGTGTTGGCTATTTCTACCACAGGGAGAACTCTAGGTGTTGGATAGCTTATGATCTACAAACCCTTTCTAGAGTGGCCAATTCCAAACAAGTGGGATATATTAAGGTGCCTAATTAG 1371 0.4384 MHNKTYPSVTTIASMPQSKTSLPSFFFFFFSTSFTIIHAIVPQNETFKFENSGEFGPYITEYDASYRMQDIFSSPFQVAFYNTTPNAFTLALRMGLRRSEQLFRWVWEANRGNPVGENATFSLGTDGNLVLAEADGRIAWQTNTANKGVVAFKLLPNGNMVLLDAQGKFVWQSFDYPTDTLLIDQYLRAKGPSKLVSRLSERDNVDGPYSLVLEPKRLALYYKSKNSPRPILYWYRIFTQQGSVENITLTSYPDTFEIEFTYALSSSTSDYRTMAEPLNNIPVGVLGMPVNNSTLTYLRLGIDGNIRLHTYFLNVRSGVWEVTYTLFDRDSHDESECQWPEKCGNLGLCQNEQCVACPLENGLFGWSNNCTAKPVTSCKASDFHYYKVEGVRHYMSKYTEGSKVSESTCGNKCTKDCKCVGYFYHRENSRCWIAYDLQTLSRVANSKQVGYIKVPN 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00672 456 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 73 454 - -
Phco10g00672 456 CDD B_lectin 72 177 IPR001480 -
Phco10g00672 456 SMART blect_4 60 177 IPR001480 -
Phco10g00672 456 ProSiteProfiles Bulb-type lectin domain profile. 56 175 IPR001480 -
Phco10g00672 456 ProSiteProfiles PAN/Apple domain profile. 378 456 IPR003609 -
Phco10g00672 456 Pfam D-mannose binding lectin 106 189 IPR001480 -
Phco10g00672 456 CDD PAN_AP_plant 377 455 - -
Phco10g00672 456 Gene3D - 57 174 IPR036426 -
Phco10g00672 456 FunFam Os04g0303100 protein 97 230 - -
Phco10g00672 456 PIRSF SLG 13 456 IPR035446 -
Phco10g00672 456 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 224 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00672 Phco-Chr10 7893061 7894431 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00672 10 7893061 7894431 Phco10g00672 10 7893061 7894431 ECH