Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g00472 ATGGCTGCTCAATTGCAAAACTCTGCAGATGAAATGATGAAGAAGCTTCATGGTGATTCTTCAGCGGCTGAACTCAATAATTCCAACACGGTTCCTTCGAAGGGTGCAAGTTCCCCATCTGATGCAAGATCATGTGTATCATCCATAGGAGATGCTTCTGGTAGTGTTAAGGATGTTGATGTGGATCATGAGTACTTGTCAACAGATCAGGGTGTTCCTTATCCTGCTGGTGGCTATTATGGTTACTACTATCCAGGTTATGGTGGTTTCTTTGGAGAGTCAGACAACCAAGGGTATTATGTTGGTGCGGATGCCATGGATCTTCAGTACCCTGTCATGCAAGCAGATAATGGATCTTATGTCTATCTCGTGCCAGGATTTCAGACTGGCTACCCTTCATACTTTCCTATAGGTACAGCTGGTGTTGAAGGACAGTATAATGTCTACCACCCTGGATCCATCTTTCAACACCCAATTGGATCACCTGGTTATTTTCCAGCTTCTCTATCATATGGAGAATTACCACCATCAACATACTCATGGGATTCTTCTCTAATCACACAAGATGGGTTACAAGGACATGGTTATAATGAACTGGCTGGTAAACCAAATGGTAGATCTAATTTGTCTTCCCAGAGTCATTCTGGTGGTATTGTATCAAAGTCTTCACCCTCATCTAACTCGGCAGAAGTGAAGGGTTCAACACCATTATTGGAGGTCTCATCAACTCATGTTAAGAGAAACCAGCCAAAACAAACAAACAAAGCACCTGTTTCAGTCCTCCATTCACCTGTTGCCAAGTTTCCCACATACAATCAAGGAAAGACTGGATTCCTCTATCCAAACAACTTGCTTAGTGTAAAAACAAATACAAAGGGCTGGGTTAGTACTGATAAGTTGAAAAACAGGAACAAGGTCAATGATTCACTTAATGAGCAGAATCAAGGTCCTAGAACAGCTAATGCAAAAGGTGCATTAGTGTCTGGAGGTAATTCTGTGAGAAACTTGGCCCTTGGTGGGAGTGGAAATGTTACCAGCAAAATCAGGACAGATCAATACAACCTTCCTGATTTTCCAACCAAATATGACCATGCACTTTTCTTTGTCATCAAGTCATACAGTGAAGATGATATCCACAAGAGCATCAAATACAACGTGTGGGCAAGTACTCCTAATGGGAACAAGAGGTTGGATGGTGCATTCCAAGATGCACAGAAGAGAATGGAAGAGAAAGGATGCAAGTGCCCCGTGTTCCTTTTCTTTTCGGTCAATGCTAGTGGTCAATTTTGTGGAGTGGCTGAGATGACTGGTCGAGTTGATTTCAACAAAAGTATGGATTTCTGGCAACAAGATAAATGGAATGGATATTTCCCTGTCAAATGGCACATTATAAAGGATGTTCCAAATCCTCAACTACGGCACATAATACTTGAGAACAATGATCACAAGCCCGTCACAAATAGTAGAGATACACAAGAGGTGAATTTTCCCCAAGGTGTTGAAATACTCAACATTTTCAAGAACTATGTGGCAAGAACTTCCATATTGGATGACTTTGAGTTTTACGAAAGCCGCCAGAAGGTCTTGCAGGAGAAGAAAACAAGGCAATCTATGCCCCATACCAGTATACAGCATGTAGATGAATTAACCACAACACTAGGGTCAGTAGAGCTATCATCATCTGTGAAGAACAATGATCCTAAGGTGGTTGAGAAAGTGAAGGACTGA 1728 0.4178 MAAQLQNSADEMMKKLHGDSSAAELNNSNTVPSKGASSPSDARSCVSSIGDASGSVKDVDVDHEYLSTDQGVPYPAGGYYGYYYPGYGGFFGESDNQGYYVGADAMDLQYPVMQADNGSYVYLVPGFQTGYPSYFPIGTAGVEGQYNVYHPGSIFQHPIGSPGYFPASLSYGELPPSTYSWDSSLITQDGLQGHGYNELAGKPNGRSNLSSQSHSGGIVSKSSPSSNSAEVKGSTPLLEVSSTHVKRNQPKQTNKAPVSVLHSPVAKFPTYNQGKTGFLYPNNLLSVKTNTKGWVSTDKLKNRNKVNDSLNEQNQGPRTANAKGALVSGGNSVRNLALGGSGNVTSKIRTDQYNLPDFPTKYDHALFFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDGAFQDAQKRMEEKGCKCPVFLFFSVNASGQFCGVAEMTGRVDFNKSMDFWQQDKWNGYFPVKWHIIKDVPNPQLRHIILENNDHKPVTNSRDTQEVNFPQGVEILNIFKNYVARTSILDDFEFYESRQKVLQEKKTRQSMPHTSIQHVDELTTTLGSVELSSSVKNNDPKVVEKVKD 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g00472 575 MobiDBLite consensus disorder prediction 307 326 - -
Phco10g00472 575 CDD YTH 367 506 IPR007275 GO:0003723
Phco10g00472 575 MobiDBLite consensus disorder prediction 21 51 - -
Phco10g00472 575 MobiDBLite consensus disorder prediction 1 54 - -
Phco10g00472 575 ProSiteProfiles YTH domain profile. 365 506 IPR007275 GO:0003723
Phco10g00472 575 MobiDBLite consensus disorder prediction 203 258 - -
Phco10g00472 575 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 96 541 IPR045168 -
Phco10g00472 575 MobiDBLite consensus disorder prediction 306 326 - -
Phco10g00472 575 FunFam YTH domain family 1, isoform CRA_a 344 521 - -
Phco10g00472 575 Gene3D ph1033 like domains 343 521 - -
Phco10g00472 575 MobiDBLite consensus disorder prediction 192 258 - -
Phco10g00472 575 Pfam YT521-B-like domain 367 507 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g00472 Phco-Chr10 4530314 4534153 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00472 10 4530314 4534153 Phco10g00472 10 4530314 4534153 ECH