Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04187 ATGAGCCCAACATGGGTTTTTGTGCTGAGTGTTGCGGCTATGTTGGTGGTTGGGAATGGACAAACATCAGTGAAGCCAGTGGTGAAGATAGTGAAGGGGAAGAAGGTGTGTGACAAAGGGTGGGAGTGCAAGGGTTGGTCTGCTTATTGCTGCAATGATACCATCTCTGACTACTTCCAGACCTACCAGTTTGAGAACCTCTTTGCAAAGCGCAATTCGCCAGTGGCACATGCTGTTGGATTCTGGGACTACCGTTCTTTTATCACTGCTGCAGCACTGTATCAGCCTCTTGGCTTTGGCACCACCGGAGGAACCACCAGTGGCCAGAAGGAGGTTGCAGCTTTCCTTGGCCATGTTGGCAGCAAAACCTCTTGTGGCTATGGGGTGGCTACTGGGGGACCCTTAGCCTGGGGTTTATGCTACAACAAGGAATTGAGTCCTGATAAACTCTACTGCGACGAATACTACAAATTGACCTACCCTTGCTCTCCTGGTGCAGCATACCATGGTCGTGGTGCCATCCCACTTTACTGGAACTACAACTATGGAAAAGCTGGGGAAGCCTTGAAGGTGGATCTGTTGAACCATCCAGAATACATAGAACAAAATGCCACCCTAGCCTTCCAGGCTGCACTGTGGCAGTGGATGACCCCACCTGAGAAGCACCTACCATCACCCCATGATGTGTTTGTTGGGAACTGGAAACCCACCAAGAATGACACATTGTCCAAAAGGGTACCTGGATTTGGTGCCACAATAAACTTGCTCTATGGGGACCAAACTTGTGGGCAGGGATCTGATAATGAGGCCATGAACAACATCATTTCTCACTATCTTTATTACCTTGATCTCATGGGTGTTGGCAGAGAAGAGGCAGGGACTAATGAAGTTCTCTCCTGTGCTGAACAAAAGGCTTTTAAACCCTCTGCTGCACCATCTTCTTCCTCAAATTGA 954 0.4895 MSPTWVFVLSVAAMLVVGNGQTSVKPVVKIVKGKKVCDKGWECKGWSAYCCNDTISDYFQTYQFENLFAKRNSPVAHAVGFWDYRSFITAAALYQPLGFGTTGGTTSGQKEVAAFLGHVGSKTSCGYGVATGGPLAWGLCYNKELSPDKLYCDEYYKLTYPCSPGAAYHGRGAIPLYWNYNYGKAGEALKVDLLNHPEYIEQNATLAFQAALWQWMTPPEKHLPSPHDVFVGNWKPTKNDTLSKRVPGFGATINLLYGDQTCGQGSDNEAMNNIISHYLYYLDLMGVGREEAGTNEVLSCAEQKAFKPSAAPSSSSN* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04187 317 Gene3D Endochitinase, domain 2 143 202 - -
Phac9g04187 317 Pfam Chitinase class I 63 290 IPR000726 GO:0004568|GO:0006032|GO:0016998
Phac9g04187 317 SUPERFAMILY Lysozyme-like 55 306 IPR023346 -
Phac9g04187 317 PIRSF Endochitinase 2 307 IPR016283 GO:0004568|GO:0005975
Phac9g04187 317 FunFam Endochitinase (Chitinase) 142 202 - -
Phac9g04187 317 PANTHER CHITINASE-RELATED 9 304 - -
Phac9g04187 317 CDD chitinase_GH19 63 300 - -
Phac9g04187 317 Gene3D - 63 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04187 Phac-Chr9 39573258 39575890 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04187 22 306 Glycoside Hydrolase AT3G16920 81.404 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04187 - - vra:106760177 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g04187 9 39573258 39575890 Phac9g04187 9 39573258 39575890 ECH