Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04168 ATGGGGGTATTTACTCAGGATTATGATACCCCTGCTGCAGTGCCTCCTTCTAGGCTTTTCAAAGCCATGACATTAGATTTCCATAACCTCTTCCCAAAGCTTGTGGATAGCATCCACAGTATTGAATTCACCCAAGGAAATGGTGCTCCTGGCACCATCAAGAAGATCACCACCATTGAAGGTGAAGAAAGCAAGTATGTGCTGCACAGAGTGGATGCAATTGATGAGGGTAGCTTTGTATACAACTTCAGCATAATTGATGGCACTGGTTTGCCTCAGACATTGGAGAAGATCTCATTCCAGACCCAACTGCTACAAGCCTCCAATGGAGGAACAATTAGGAAGGTCAATGCCAAATTTTTCACAAAAGGTGAAGCTCTTCTCACTCAAGAAGACCTCAAGGCTAACCAAGCCAAGATCCAAGGACTTAGAATCGATGCAGTGGACGAAGCAAACCTGGGATTCGACTACAGCATAGTGGGAGGACCAGGGTTGCATGAAAGTTTGGAGAAAATCACACTTCAGACGAAGGTGGTGGCTGGTCCTGATGGTGGCTCCATCTCCAAGGTCTCTGTCAAATACCACACCAAAGGCGATGCACCTCTCTCAGAGGCAGTGCTTGAAGAATCAAAGGCAAGAGGAACTGGGTATGTGAAGCAAAAGGTGGATGTGGTCGATGAAGATAACTATGTGTATCACTACACAATAATTGAAGGCAATCTTCTCACAGAGCCATTGGAGAAGGTGTCTAATGAGTACAAATTGGTGGCAAACCCTGATGGAGGATGCATTGTGAAGACCACACGCAAATACTACACAAAAGGAGATGCTGAACTCACAGAAGAGTTCCTGAAGTCTACTAAGGAGATGTCTGCAGTGTTTGCCAAGGCTGTTGATGATTATCTTTTGGCTAATCCTGATTACAACTAA 930 0.4505 MGVFTQDYDTPAAVPPSRLFKAMTLDFHNLFPKLVDSIHSIEFTQGNGAPGTIKKITTIEGEESKYVLHRVDAIDEGSFVYNFSIIDGTGLPQTLEKISFQTQLLQASNGGTIRKVNAKFFTKGEALLTQEDLKANQAKIQGLRIDAVDEANLGFDYSIVGGPGLHESLEKITLQTKVVAGPDGGSISKVSVKYHTKGDAPLSEAVLEESKARGTGYVKQKVDVVDEDNYVYHYTIIEGNLLTEPLEKVSNEYKLVANPDGGCIVKTTRKYYTKGDAELTEEFLKSTKEMSAVFAKAVDDYLLANPDYN* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04168 309 CDD Bet_v1-like 2 143 - -
Phac9g04168 309 Gene3D - 214 309 IPR023393 -
Phac9g04168 309 Gene3D - 2 139 IPR023393 -
Phac9g04168 309 FunFam Major pollen allergen Bet v 1-A 1 144 - -
Phac9g04168 309 Pfam Pathogenesis-related protein Bet v 1 family 1 132 IPR000916 GO:0006952
Phac9g04168 309 Pfam Pathogenesis-related protein Bet v 1 family 217 305 IPR000916 GO:0006952
Phac9g04168 309 Pfam Pathogenesis-related protein Bet v 1 family 144 200 IPR000916 GO:0006952
Phac9g04168 309 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 162 194 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Phac9g04168 309 PANTHER - 216 307 - -
Phac9g04168 309 Gene3D - 140 213 IPR023393 -
Phac9g04168 309 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Phac9g04168 309 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Phac9g04168 309 PRINTS Major pollen allergen Bet V1 signature 65 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Phac9g04168 309 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Phac9g04168 309 PRINTS Major pollen allergen Bet V1 signature 84 97 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Phac9g04168 309 PRINTS Major pollen allergen Bet V1 signature 109 125 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Phac9g04168 309 FunFam Major pollen allergen Bet v 1-A 210 309 - -
Phac9g04168 309 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 239 271 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Phac9g04168 309 SUPERFAMILY Bet v1-like 215 309 - -
Phac9g04168 309 SUPERFAMILY Bet v1-like 2 139 - -
Phac9g04168 309 SUPERFAMILY Bet v1-like 144 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04168 Phac-Chr9 39444526 39457390 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04168 - - pvu:PHAVU_009G252800g 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g04168 9 39444526 39457390 Phac9g04168 9 39444526 39457390 ECH