Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04164 ATGGGGGCACTCACTTTCACTGAGGAGTTTACTAGCAGTGTGCAGCCAGGAAGGTTGTTCAAGGCTTTGATCCTTGATGCTCCAAACCTCATCCCTAAGCTGATGCCTGATGCCATTAAGAATGTTCAATTGGTTGAAGGGAACGGAGGCCCTGGAAGCATTCAGGAGATAACCATTGCTGAAGGCAAGTTTCAAACAGAAATGACTAACAAAGAGATCGTTATTGGTAATGCCTTCAATGCAGGTGATAAGATCAAACACTTGAAGCATAGAATTGATGCAATAGACCCAGAGAAATTGACTTACAGCTACGCAGTGATTGAGGGGGATGGTGCACTGGAAAAGGTGGATTCAATTTCACATGAGATTAGGTTCGAGGCCACTGAGGAGGGAGGTTGCAAGACCAAGAATGTGAGCACTTATCATCCCAAAGCAGGGGTTGATGTCAAAGAGGAGGATTTCAAGGCTGCAAAGGAAGAAGGTTTGGCTCTCCTCAAGGTAGTGGATGCGTATCTTGTGGCAAACCCAGAGGCCTATGCTTGA 543 0.4604 MGALTFTEEFTSSVQPGRLFKALILDAPNLIPKLMPDAIKNVQLVEGNGGPGSIQEITIAEGKFQTEMTNKEIVIGNAFNAGDKIKHLKHRIDAIDPEKLTYSYAVIEGDGALEKVDSISHEIRFEATEEGGCKTKNVSTYHPKAGVDVKEEDFKAAKEEGLALLKVVDAYLVANPEAYA* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04164 180 FunFam Major pollen allergen Bet v 1-A 76 179 - -
Phac9g04164 180 Pfam Pathogenesis-related protein Bet v 1 family 78 174 IPR000916 GO:0006952
Phac9g04164 180 Pfam Pathogenesis-related protein Bet v 1 family 1 69 IPR000916 GO:0006952
Phac9g04164 180 FunFam Major pollen allergen Bet v 1-A 1 75 - -
Phac9g04164 180 SUPERFAMILY Bet v1-like 4 179 - -
Phac9g04164 180 CDD Bet_v1-like 5 172 - -
Phac9g04164 180 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Phac9g04164 180 PRINTS Major pollen allergen Bet V1 signature 50 59 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Phac9g04164 180 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Phac9g04164 180 Gene3D - 2 178 IPR023393 -
Phac9g04164 180 PANTHER - 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04164 Phac-Chr9 39426731 39427492 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04164 - - pvu:PHAVU_009G252400g 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g04164 9 39426731 39427492 Phac9g04164 9 39426731 39427492 ECH