Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04163 ATGCCCATTTCCATCAAAGTGATGATCATTCCTATTAAACTACTCCATAACCACAAGACCTATAAAAGTGCTCTTTCACAACCTAGAGTTTTTTCTGTGATCTTTGCAATCAACACAACATTCACCATGGGAGGCACAACTTTCACATATGATTATTCCTCCCATGTTGCTCCATCACGCATGTTCAAGGCCTTGATCACTGACTCTAAAACTTTGCTTCCAAAGCTCTTACCACAGTTCATAAAAGAGGTCAACTTGATCCAAGGAGATGGGGAAGCTGGAAGCATTGAACAAGTTAACTTTGCTGAAGCTAGCCCCTTCAAATATGTGAAGCACAGGATTGATGAGGTTGATAAGGAGAAATTGGTGTGCAAATACACTATGATTGAAGGGGGTCCATTGGGGGAGAAGCTTGAGTCTATAGCTTATGAGGTTAACTTTGAGGCCACTAGTGATGGTGGTTGCCTTTGTAAAATGACAAGCAAATACAATGTGATAGGGGCTTTTGAGATCAAAGAAGAAGAGATTAAGGAAGGAAGGGAAAGCTCTCTTGGAGTCTGCAAAGTGGTGGAAGCCTACCTGCTTGAGAATCCACAAGTCTATGCTTAA 609 0.4154 MPISIKVMIIPIKLLHNHKTYKSALSQPRVFSVIFAINTTFTMGGTTFTYDYSSHVAPSRMFKALITDSKTLLPKLLPQFIKEVNLIQGDGEAGSIEQVNFAEASPFKYVKHRIDEVDKEKLVCKYTMIEGGPLGEKLESIAYEVNFEATSDGGCLCKMTSKYNVIGAFEIKEEEIKEGRESSLGVCKVVEAYLLENPQVYA* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04163 202 PRINTS Major pollen allergen Bet V1 signature 108 127 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Phac9g04163 202 PRINTS Major pollen allergen Bet V1 signature 186 196 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Phac9g04163 202 PRINTS Major pollen allergen Bet V1 signature 45 65 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Phac9g04163 202 PRINTS Major pollen allergen Bet V1 signature 152 168 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Phac9g04163 202 PRINTS Major pollen allergen Bet V1 signature 127 140 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Phac9g04163 202 PRINTS Major pollen allergen Bet V1 signature 68 78 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Phac9g04163 202 PRINTS Major pollen allergen Bet V1 signature 92 101 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Phac9g04163 202 CDD Bet_v1-like 51 194 - -
Phac9g04163 202 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 131 163 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Phac9g04163 202 Pfam Pathogenesis-related protein Bet v 1 family 44 196 IPR000916 GO:0006952
Phac9g04163 202 Gene3D - 38 202 IPR023393 -
Phac9g04163 202 FunFam Major pollen allergen Bet v 1-A 43 201 - -
Phac9g04163 202 SUPERFAMILY Bet v1-like 46 201 - -
Phac9g04163 202 PANTHER - 43 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04163 Phac-Chr9 39423298 39424451 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04163 - - vun:114162549 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g04163 9 39423298 39424451 Phac9g04163 9 39423298 39424451 ECH