Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04162 ATGTTTGTGGCATTGCTCTTGCTGGTGGTATTGAGCAATGCCGTGAGAGTTAGTGGGGATGGTGGGCAATGTGGTTCCAACCCAACACTAAACCCAAGACCACACAGTGTCTCCATTTTGGAGTTTGGTGCAGTTGGAGATGGTAGAACACTCAACACCATTGCGTTCCAGAATGCCATCTTCTATCTTAAGTCATTTGCCGATAAGGGTGGCGCTCAGCTCTATGTTCCTCCGGGTAAATGGCTCACTGGAAGCTTCAATCTTACCAGCCATCTCACCCTCTTTTTGGAAAAAGGTGCTGTCATAATTGGATCTCAGGATCCAACTCACTGGGATGTTATTGAACCCTTGCCTTCTTATGGCCGAGGCCTTGAAGTTCCTGGGGGAAGATATCAGAGCTTGATAAATGGATACATGTTACATGATGTGGTCGTAACAGGTAACAATGGAACCATTGATGGCATGGGAATGGTTTGGTGGGAGTGGTATAGCTCCCATTCCTTGAACCACAGCCGGCCTCATCTGGTTGAAATTGTGGCATCTGATTATGTGGTGGTTTCAAATCTTACATTCTTGAATGCCCCAGCTTATAGCATACACCCAGTTTATTGCAGCCATGTACATATTCAAAATGTTTCAATCTCTACTCCTCCAGAATCTCCTTATACTGTTGGTATAGTGCCAGATTCTTCTGAATATGTGTGTATAGAAGATTGTATTGTTGGCATGGGATTTGATGCAATTTCTCTAAAAAGTGGGTGGGATGAGTATGGCATTGCCTATGGCAGGCCAACTGAGAATGTACACATCAGAAGGGTGCATCTTCATGCATTTTCTGGCTCTGCTCTTGCATTTGGCAGTGATATGTCTGGTGGCATTTCAAATGTTCTAGTGGAGCATGCTCATCTTTTGAAGTCAAACAGTGGCATTGAGTTTAGAACCACCAGAGGAAGAGGTGGTTATATGAAAGATATTGTTATATCAGACATACAAATGGAAAATGTACACACAGCAATTGCTGCCACTGGTAATTGTGGTTCTCATCCTGATGACAAGTTTGATCCAAATGCACTCCCACTTTTGGATCACATTACCTTGAGGGATGTCACAGGTAAAAATATCACCATTGCTGGAAACTTTGCTGGAATAGAGGAATCCCCTTTCACAAACATATGCCTTTCCAACATAACCTTGTCTACAAATTCTGTTTCTCCCATTACTTGGGAATGCTCAAATGTGTCTGGATTTGCAGACTCAGTGCTCCCAGAACCATGTCCTGAACTTGGAACTCCATCATATGATTCTTCCTCCTCCTGTTTCTACCTTCACAGTATCAGTGGAAAAATTGCAGTGCAGTGA 1359 0.4341 MFVALLLLVVLSNAVRVSGDGGQCGSNPTLNPRPHSVSILEFGAVGDGRTLNTIAFQNAIFYLKSFADKGGAQLYVPPGKWLTGSFNLTSHLTLFLEKGAVIIGSQDPTHWDVIEPLPSYGRGLEVPGGRYQSLINGYMLHDVVVTGNNGTIDGMGMVWWEWYSSHSLNHSRPHLVEIVASDYVVVSNLTFLNAPAYSIHPVYCSHVHIQNVSISTPPESPYTVGIVPDSSEYVCIEDCIVGMGFDAISLKSGWDEYGIAYGRPTENVHIRRVHLHAFSGSALAFGSDMSGGISNVLVEHAHLLKSNSGIEFRTTRGRGGYMKDIVISDIQMENVHTAIAATGNCGSHPDDKFDPNALPLLDHITLRDVTGKNITIAGNFAGIEESPFTNICLSNITLSTNSVSPITWECSNVSGFADSVLPEPCPELGTPSYDSSSSCFYLHSISGKIAVQ* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04162 452 Gene3D - 26 418 IPR012334 -
Phac9g04162 452 SUPERFAMILY Pectin lyase-like 32 429 IPR011050 -
Phac9g04162 452 PANTHER PECTIN LYASE-RELATED 5 434 - -
Phac9g04162 452 Pfam Glycosyl hydrolases family 28 135 414 IPR000743 GO:0004650|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04162 Phac-Chr9 39416969 39420503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04162 1 445 Glycoside Hydrolase AT3G16850 62.640 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04162 - - gmx:100777503 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g04162 9 39416969 39420503 Phac9g04162 9 39416969 39420503 ECH