Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04122 ATGGAACCTCACAGTTTGTGTTGCTCATTGAAAATATTTGCACAACATATCAACACTGTCACTGAGCTTATGATCTCACCTTGTCATTGTTTTGCAGTGCTTTTGGTTGCATGTCTAGCAACCCTCTATGCTGCATGCAGAAGAAAAGCACCAATTTATTTGATAGACTTCAGCTGCTACTGTCCACCCAGTTCTTATAGGCTACCGCTGGCCATGTTTGAAGAGAATCAACTTTATGATGGCATGGATCCAGAGGCTGTTGCTTTCCAATGCAAGATCATGGCCAAATCAGGATTCAGTGAGCTAACATCCATTTCTCCATCTCTTGCACAGATACCCAAAATCAAGGCTCTGTCCTTTGCCATCGAGGAGGCTGAGACAATCATGTGTTCAGTGATCAAAAACCTGTTTGAGAAAAACAAGATAAACCCTAAAACCATTGACATACTCATCACTAATAGTAGTGTCTTCTGCCCCACCCCATCTCTTAGTGCCATGGTGGTTAACAAGTTCAGAATGAGGAGCAACATCATGAGTTTCAACCTATCTGGTATGGGATGCAGTGCTGGAATTATTTCAATGAGTCTAGCTAAAGACTTGTTGAGAGTTCATAGGAACTCACTAGCTTTAATAGTAAGCACAGAGACTCTGAGTCTGAATTGGTACACGGGTAAAGTCCCTTCTATGCTGCTATCCAATTGTCTATTCAGAATGGGTGGGGCAGCTATATTGATGTCTAGTAGGGTCCAAGATAAGCACAAGGCAAAGTATAAACTACAGCATATTGTTAGAACAATCACTGCACAGGATGATCAATCTCATGGCTGTGTTTACCAACAAGGGGATCCAGAGGACAAAGAAGGTGTATCCATATCAAAGAGCATAGTCAATGTGTCTGGAGATGCACTGAAGAAAAATATAGCTTCACTAGGACCATTGGTTCTGCCTCTGAGGGAGCAATTCTTGTATTTATTTTCTATTATTTGTCGCAAAATGTGTTGTACAAGAAGGATAAGCATCTATACTCCAAATTTCAACCTTGCTTTTGAGCATTTCTGCATACATTCAGGGGGAAGAGCCATCATTGAAGCAGTTGAAAGAAACTTAAGGCTAAGGAAACAGGACGTGGAGCCATCAACCATGACTCTCTACAGGTTTGGAAATATTTCATCATCTTCAATTTGGTATGAGCTAAGCTACATAGAAGCAAAAGGGAGGATGAAATGTGGGGATAGGGTGTGGCAAATTGCCTTTGGAAGTGGATTCAAGTGTAACAGTGCAGTGTGGAAATGTGTATGTGACATGAAGCCAGACACCACCACGGCATGGAGGGATACAATTCACTTGTACCCTGTGGATATTATGAGAACAAACTGA 1377 0.4161 MEPHSLCCSLKIFAQHINTVTELMISPCHCFAVLLVACLATLYAACRRKAPIYLIDFSCYCPPSSYRLPLAMFEENQLYDGMDPEAVAFQCKIMAKSGFSELTSISPSLAQIPKIKALSFAIEEAETIMCSVIKNLFEKNKINPKTIDILITNSSVFCPTPSLSAMVVNKFRMRSNIMSFNLSGMGCSAGIISMSLAKDLLRVHRNSLALIVSTETLSLNWYTGKVPSMLLSNCLFRMGGAAILMSSRVQDKHKAKYKLQHIVRTITAQDDQSHGCVYQQGDPEDKEGVSISKSIVNVSGDALKKNIASLGPLVLPLREQFLYLFSIICRKMCCTRRISIYTPNFNLAFEHFCIHSGGRAIIEAVERNLRLRKQDVEPSTMTLYRFGNISSSSIWYELSYIEAKGRMKCGDRVWQIAFGSGFKCNSAVWKCVCDMKPDTTTAWRDTIHLYPVDIMRTN* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04122 458 PANTHER 3-KETOACYL-COA SYNTHASE 29 453 IPR012392 GO:0006633|GO:0016020|GO:0016747
Phac9g04122 458 Gene3D - 85 431 IPR016039 GO:0016746
Phac9g04122 458 CDD CHS_like 32 429 - -
Phac9g04122 458 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 350 430 IPR013747 -
Phac9g04122 458 PIRSF Very_long_ch_3-ktacl-CoA_syn 4 458 IPR012392 GO:0006633|GO:0016020|GO:0016747
Phac9g04122 458 SUPERFAMILY Thiolase-like 40 248 IPR016039 GO:0016746
Phac9g04122 458 Pfam FAE1/Type III polyketide synthase-like protein 46 332 IPR013601 GO:0006633|GO:0016020|GO:0016747
Phac9g04122 458 SUPERFAMILY Thiolase-like 260 431 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04122 Phac-Chr9 39155176 39156767 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04122 32 452 Acyl Lipid Metabolism Gene Families AT1G71160 54.502 3.69e-167 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04122 K15397 - gmx:100783404 838.95