Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04118 ATGTTAGACCTCAAATACATATGGGTGCTTGTTTCCATCAACAGGTTCATTCAAGACACCTTGGAAGATGAGAAGACCAGGAATGGTCTAAAACTGAGATGCACCTCCAAGTTAAGGATTCAAAAGCAGGAATTCTTTGAATTCTCTGAGCAGTCAGTGTTGTCTAATCTTTACTGGGGCATTGACAGCATTGAGGCTGCAATTCAAGCTCAACAGCCAGAAGATAGATCCTTCAGGCTGATGAACTCAGAACAAATGCTTCAGGTGCCTGCAATGCTTGATGAGGAAGAGGTCACAGCCACAATTCCAAACCGTTACTTGGTGTGCTGCTCCTACTTTTACCTCTCAGTGGTTAGGAAGCTCCAGGGAGATGAGTGGCAGGCTGCACTGCATTTTCTCCAAGCAGTGTTGGTCTCACCAAGGCTTGTTTGGACAGAATTTGCGGCAGAACTTTGTGAAAGTCTTTTCCCCCAATCGAGCATTCACATGATGCAGGGTAACTGCAGCAGTAGAAGTTTGGAATCTGTGTCTTCTGAGGATGAAATGGATGGAGCAATTAGGGAGGTGGCAAGGAGGTACAAGGAGTGTCTGGTGTATTACCAGGTCATGCTTTATGGAGAGACTCCATGGTGGCGCAGTTACTGCAGCAAACAATCACCACCTTCTGTGGATGTACCAAATACTAGCTGTGTTTCTTCAACTTCAGTTCACAATGAATCAAGATTGAAAAGTGGCAATATGTATAAAAAGGTTCATCCATTTGATTCTCAAGATGTGATGCATACAATGGAACATGAGTCAAAACAATTCATGGATGTTGCTGAATATGAAGGTGATAAGAAGGCCCTTAAACAACTTAAGTCAGTTGAGTATCACGGCAAAGAGAACCAAACAATTTCAAGTATCAAATGTTTCAAAGATATGATGATAGAAGCACACTCTAAGACACCAGTATCAGTGGATGCATTCTTTAAGGATTTTAGAGCCAGAAAGGACATGGAAAATGTGGATGACAGAAAAATTTATATACAAACCACAATAACTAAAGCAGATGATCTACCATCAGAAATTCACAACTGGAAGCTACAACAACACTCTGGTTTGCCTCAAGCTCATCAACATCCCATTCAAGAACAGTTGGAAAAGAGAAACATAATTAAGCTTGATTCTAGCAGATTCAACAGGTCCATAGAAGATATTGCTTTATCTATCTCAAAATACAGAGATAAAACTGGACATACTCCTTTAAATTGTCTTGGAGAGGGTGAATTAAATGAGGATGCATCACAGCCAAAAAAATTGTTTGATCATGTAACATTTACACCTGCTTGCAAACATAGGCCTAGCCATAAAAGCCATGAAAACTCCGAGATACAAAGATTGTATAGCCTAGGAAAGTTTGATGAACTTTGTTTAAACTCCAGAAGATATTCCCTGCAAGACTTGTCAGAACTGACTGAAAGGAGAGTTACAGAACTACATTATTCAGAGGTATTAGGAAAATGTGATGAAGAATATACTGTAGACATTGCATCAATTTATGAGAGCTTGATTAGTTCATCTGGCGCCACTTATGCTTCCTTAAAGGATGTGATTTTGGATGAGCTGCTAATAGCTATCTCTACTTCCAAAGAGGAAAGAAAAATAAGAGCATCAGTGTCTATTCTGACAACAATAATTTCAAGGAACAAGTCAATCATAGAAGATGTCAAGAAGAAAGGTTTAAGGTTGTGTGATTTGGCAAGTGCTCTAAAACAAAATGTCCATGAGGCAGCAATTCTAATCTATTTAATAAATCCTTCACCTATAGATATAAAAACATTGGAACTTCTGCCAATATTAGTGGAGATTGTATGCACTTCAAACAGTTACAAGAATAGGCCAGAGTCACTTCTTTTGACACCTCATGCTGCATCCTTGATGATCATTGAAGAGCTAGTAACTTCATTTGACTATGCCACAAATAACATGCATTTGGCTACCATCAGTTCTCCTCATGTTCTCAGTGGATTTCTAGAAGTTGCCAGGAATGATAATCTAGAAGAATTTTTCTCTTTAACCACCATTCTTATAAAATGCATGCAGTATGATCCTCAGTGCAGAAAGTATGTATCACAATTCACTCCACTTGCTCCCTTTATCCACCTTTTGCAGTCAGAAAACATCCGCGCCAAATGCACTGCTCTAGAATTTTTTCAGGAAATCCTTTGTATACCACGATCATCAGCTATTAGTCTGCTGCAACGTGTGCAGCAAGAAAGAAGCATCAATATTATGCAGATACTAATGCATTGTGCACATCAGTTACAACCTGATCACCAGCTTTTAGCAGCAAATTTTTTGCTTCAGTTAGACATACTGAACTCTCCTGATAAAGCCGTGTTTAGAGAAGAAGCAGTGCAGATCCTTCTCAGGGCAATGACATCAGAAGAAAGCTCAGAGCAGATATTATCTGCTTCCATTCTATCAAATCTGGCTGGTACATTTTCTTGGACAGGAGAACCATATACAACTGCATGGTTGTTGAGAAAGACAGGTTTGACCTCTCCCTATCACCAGAATATGATAAAGAACTTCAACTGGTTGGATCAGAGTCTACAGGATACTAGCACAGATTTGTGGTGCAGTAAAATTGCCAAATGTATCATAAGTCTTGGGGATCCTGTCTTCCATACTTTAGATAGGGTTCTTAGAAGCAAGATAAAGAGGGTTTCTAGAGATTGCCTTGTAGCAATTGCATGGCTTGGATGTCATATATCAAAAATTCCAGACAGCATCAGTTATTCTGCATCTGAGATTATACTTAGTGGAGTTGAGCAGTTTCTGCATCCTGGGATGGAGTTGGAGGAAAGACTTCTAGCATGTATGTGCATGTTTAACTATGCCTCGGGAAAAGGAAAACAAAAACTAATGCATTTCTCAGAAGGAGTAAAGGAATCACTAAGGCGCCTTTCAAATGTTATTTGGATGGCTGAGGAATTACATAGAGTAGCCGATTTCTTGCTCCCAAACATATCACGTATTTCATGCGTTCACACACAAATCCTTGAGGCAGGTTGCAGCTTCAGTTTAGCAGTTTGCTCTCTCATCTACTTCAAGGGATTGCTGTTCAGTGGGTATTCAGATGGAACAATCAAGGTTTGGGATATTAGGGGGCACTCAGCCAGTCTTGTATGGGACATTAAGGAGCACAAGAAGTCAGTGACATGCTTTTCACTTTATGAACCATCTGACTGCCTTATAAGCGGTTCCACTGATAAAACCATAAGGGTGTGGAAAATGATCCAGAGAAAGCTGGAATGTGTTGAAGTTATAGTATTGAAGGAACCAATTCATCATTTGCGGGCACATGGTGAAACAGTTTTTGCCATTACAGAAAGCCAGGGACTAAAGGTGATGCTTCAAAACTTCCCATGA 3417 0.3989 MLDLKYIWVLVSINRFIQDTLEDEKTRNGLKLRCTSKLRIQKQEFFEFSEQSVLSNLYWGIDSIEAAIQAQQPEDRSFRLMNSEQMLQVPAMLDEEEVTATIPNRYLVCCSYFYLSVVRKLQGDEWQAALHFLQAVLVSPRLVWTEFAAELCESLFPQSSIHMMQGNCSSRSLESVSSEDEMDGAIREVARRYKECLVYYQVMLYGETPWWRSYCSKQSPPSVDVPNTSCVSSTSVHNESRLKSGNMYKKVHPFDSQDVMHTMEHESKQFMDVAEYEGDKKALKQLKSVEYHGKENQTISSIKCFKDMMIEAHSKTPVSVDAFFKDFRARKDMENVDDRKIYIQTTITKADDLPSEIHNWKLQQHSGLPQAHQHPIQEQLEKRNIIKLDSSRFNRSIEDIALSISKYRDKTGHTPLNCLGEGELNEDASQPKKLFDHVTFTPACKHRPSHKSHENSEIQRLYSLGKFDELCLNSRRYSLQDLSELTERRVTELHYSEVLGKCDEEYTVDIASIYESLISSSGATYASLKDVILDELLIAISTSKEERKIRASVSILTTIISRNKSIIEDVKKKGLRLCDLASALKQNVHEAAILIYLINPSPIDIKTLELLPILVEIVCTSNSYKNRPESLLLTPHAASLMIIEELVTSFDYATNNMHLATISSPHVLSGFLEVARNDNLEEFFSLTTILIKCMQYDPQCRKYVSQFTPLAPFIHLLQSENIRAKCTALEFFQEILCIPRSSAISLLQRVQQERSINIMQILMHCAHQLQPDHQLLAANFLLQLDILNSPDKAVFREEAVQILLRAMTSEESSEQILSASILSNLAGTFSWTGEPYTTAWLLRKTGLTSPYHQNMIKNFNWLDQSLQDTSTDLWCSKIAKCIISLGDPVFHTLDRVLRSKIKRVSRDCLVAIAWLGCHISKIPDSISYSASEIILSGVEQFLHPGMELEERLLACMCMFNYASGKGKQKLMHFSEGVKESLRRLSNVIWMAEELHRVADFLLPNISRISCVHTQILEAGCSFSLAVCSLIYFKGLLFSGYSDGTIKVWDIRGHSASLVWDIKEHKKSVTCFSLYEPSDCLISGSTDKTIRVWKMIQRKLECVEVIVLKEPIHHLRAHGETVFAITESQGLKVMLQNFP* 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04118 1138 PANTHER OS04G0584500 PROTEIN 2 1002 - -
Phac9g04118 1138 SUPERFAMILY ARM repeat 598 1004 IPR016024 -
Phac9g04118 1138 Gene3D - 532 991 IPR011989 -
Phac9g04118 1138 SMART WD40_4 1054 1093 IPR001680 GO:0005515
Phac9g04118 1138 SMART WD40_4 1009 1049 IPR001680 GO:0005515
Phac9g04118 1138 SUPERFAMILY WD40 repeat-like 1023 1124 IPR036322 GO:0005515
Phac9g04118 1138 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1061 1094 - -
Phac9g04118 1138 ProSiteProfiles Trp-Asp (WD) repeats profile. 1035 1058 IPR001680 GO:0005515
Phac9g04118 1138 Pfam WD domain, G-beta repeat 1026 1049 IPR001680 GO:0005515
Phac9g04118 1138 Pfam WD domain, G-beta repeat 1059 1093 IPR001680 GO:0005515
Phac9g04118 1138 ProSiteProfiles Trp-Asp (WD) repeats profile. 1061 1094 IPR001680 GO:0005515
Phac9g04118 1138 Gene3D - 1009 1136 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04118 Phac-Chr9 39136788 39146718 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04118 - - gmx:100782870 2076.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g04118 9 39136788 39146718 Phac9g04118 9 39136788 39146718 ECH