Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g04049 ATGGCAGCGGCACGAGAGCTTCCGGGGTTTTACTTTGATCCTGTGAAGAATAGATATTTCCCCATCAAAGGCCCCATTCCTGGCTCTTCTTCTACTCCCAAGGCACCACAAACCCCTTCCAATAAGAGTGGTAGGAGTTGTTGTAGGAAGCTTAGAAACAGAACCTTGTCCAAGCTGCTTCAGGCTAGGGAGTTGGATGGTCACCGTGTCGTTTACTCTCATAATTGCAAATGTAACTTTGCCGAGGAATGCGGGAAAATTCAAGCATCTAAACCTGTGGTCTGGAGATATCGGGGAACTGATAAGTTGGGTGTTTGTGCTTTGGAACACTTGCGCGTTGATGTGCAGACGTTGGAGGGGCAAACGGAAACTGATGTTTTGTTGACGGGCAGCATAAATGGCTCCTTGAGTTTTTCTGAAGTTGGAGGAGCAGGGCAATATTTTGATGACGGGACAAAATGGAGAGCAGATTGTGTGATGAATTATGTTAAAGGGAAAACATTTGAGCACAGTGAAGTGCATAAGCCAGTTTTCAGACCTAATCGAGCTGCATTGCTTATGCCCTCTAGAATATCTTGTATACGGTTGGGTCCAAAGTGCTCTCCTCACGCAGCGAATGATGGTTCCGTTGCAGGACGTGTTTTATTTACTACACTGGGGTCAGAAACATCAGGTGGATCACTTTACACTCTTGGTCTTGTTGAACCATTAAATCTTGGACCAGGTATACTGAACACATGGAGCGGACTTGAGGAAATTGCTTCTTTCAAATGTACTCTTTGGACAGCAGAATATGATTATAATAGACATCGGGCTGTAATTGGTACAAATTTAGGAGGTGCTTCAGTGGATCTGGAAACAAGGACGGAAACATGGTTTTTACGATGTAAAAGTGATGTTTTTGCGCAACAGATTATTAATTCTGGAAATGTGATTTTATGCGGGCTTAGGAATGGGGCAATTGTCACTGCAGATTTTCGTGAGAAAAGAGAAAGGCTTTCTCATAGGCTTATTACCCATCGGATACCTTACACTTCAGATACTAAAGTTGGAGGTTCAAAAAAGGAATGGTTCAAGCTCAAAGGTGACATATATGCTTCTCACACAATTAGGATGCCTTCATCTATATCTTCTTTGGTGTCACTTCAGTTTGATGAGCAGTACTTTCTAGCAAGCTCAATGGATGGATCGATTAGGCTTTATGACCATCGTCTACTTCAGAGGGGTGCTGTTCAATGTTATGATGGGCATGTGAATTCTCATACTCGTATACAAATTGGTGTCGATCCAGCTGAGAGATTTGTTATGTCAGGTGGAGAGGATTGCAAGCTACGGTTATGGAGTCTCAAGTCTGGTGAATTGCTTTTTGAGGACAAGTTCTCTAATTCAATTATCTCCGCTATGTGCTATAAAACATACAGTAGTTGTAGAGCAGAAGAGGAAAACCAGTACAAGTGTGACTTCTCTCAGGGTGCATGGCTTGGATCACATGAAGGACTGTTTTATATGCGTTGGTGA 1518 0.4295 MAAARELPGFYFDPVKNRYFPIKGPIPGSSSTPKAPQTPSNKSGRSCCRKLRNRTLSKLLQARELDGHRVVYSHNCKCNFAEECGKIQASKPVVWRYRGTDKLGVCALEHLRVDVQTLEGQTETDVLLTGSINGSLSFSEVGGAGQYFDDGTKWRADCVMNYVKGKTFEHSEVHKPVFRPNRAALLMPSRISCIRLGPKCSPHAANDGSVAGRVLFTTLGSETSGGSLYTLGLVEPLNLGPGILNTWSGLEEIASFKCTLWTAEYDYNRHRAVIGTNLGGASVDLETRTETWFLRCKSDVFAQQIINSGNVILCGLRNGAIVTADFREKRERLSHRLITHRIPYTSDTKVGGSKKEWFKLKGDIYASHTIRMPSSISSLVSLQFDEQYFLASSMDGSIRLYDHRLLQRGAVQCYDGHVNSHTRIQIGVDPAERFVMSGGEDCKLRLWSLKSGELLFEDKFSNSIISAMCYKTYSSCRAEEENQYKCDFSQGAWLGSHEGLFYMRW* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g04049 505 Pfam WD domain, G-beta repeat 412 448 IPR001680 GO:0005515
Phac9g04049 505 SUPERFAMILY WD40 repeat-like 284 469 IPR036322 GO:0005515
Phac9g04049 505 Gene3D - 256 497 IPR015943 GO:0005515
Phac9g04049 505 ProSiteProfiles Trp-Asp (WD) repeats profile. 414 457 IPR001680 GO:0005515
Phac9g04049 505 PANTHER DDB1- AND CUL4-ASSOCIATED FACTOR 4-RELATED 1 505 - -
Phac9g04049 505 MobiDBLite consensus disorder prediction 23 47 - -
Phac9g04049 505 MobiDBLite consensus disorder prediction 30 46 - -
Phac9g04049 505 SMART WD40_4 407 448 IPR001680 GO:0005515
Phac9g04049 505 SMART WD40_4 363 402 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g04049 Phac-Chr9 38707004 38714173 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g04049 377 473 Miscellaneous Gene Families AT5G08390 28.283 5.62e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g04049 K11799 - gmx:100798753 837.795