Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03945 ATGGCAGTTTCCATGAGGGATCTGGATCCAGCTTTCCAGGGAGCTGGACAAAAGGCTGGACTTGAGATATGGCGTATTGAGAATTTTAATCCAGTTCCTGTTCCAAAGTCCTCTTATGGGAAATTTTTCACTGGAGACTCCTATGTGATCTTAAAGACAACTGCATCAAAAAGTGGTGCTATGCGCCATGACATCCATTACTGGCTTGGTAAAGACACTAGTCAGGATGAAGCTGGTGCTGCAGCCATCAAAACAGTTGAGCTGGATGCAGCTCTTGGAGGACGTGCTGTTCAGTATCGTGAAGTGCAAGGCCATGAAACTGAAAAGTTCCTGTCTTATTTCAAACCATGTATTATCCCTCAAGAAGGTGGAGTTGCTTCTGGTTTCAAACATCCTGAAGCTGAAAAGCATAAGACACGGTTGTTTGTATGCAGAGGAAAACATGTTGTACATGTCAAAGAGGTTCCATTTGCTAGAGCCTCACTGAATCATGATGATATTTTTGTTCTGGATACCGAATCAAAAGTTTTCCAATTTAATGGTTCCAATTCATCAATTCAAGAAAGGGCTAAAGCTTTGGAAGTTGTACAGTATATTAAGGATACCTATCATGATGGAAAATGTGATGTAGCTGCTGTTGAGGATGGAAAGTTGATGGCTGATCCTGAAACTGGAGAATTCTGGGGTTTCTTTGGGGGATTTGCTCCTCTTCCAAGAAAAACAGCTGGTGATGATGATAAGGCTACTGATTCTCGCCCTCTGAAGCTGCTCTGTATTGAAAAGGGTCAGGCAGAACCTGTGGAGGCTGATTCTTTGAAAAGGGAATTACTAGACACAAATAAATGCTATATTCTTGATTGTGGGTTTGAAGTGTTTGTCTGGATGGGTAGAAATACTTCTCTTGATGAAAGAAAAAGTGCAAGTGGAGTTGCAGATGAGTTAGCCAGCGGCATTGATAAACTGAAACCCCAAATAATTCGTGTGATAGAAGGATTTGAAACAGTGATGTTCAGGTCCAAATTTGATTCTTGGCCACAGACGGCTGATGTAACAGTATCTGAAGATGGTCGTGGCAAGGTAGCGGCTCTTCTAAAACGCCAAGGAGTAAATGTGAAGGGTTTGTTGAAAGCTGATCCAGTGAGGGAAGAACCTCAACCCCACATTGATTGCACAGGGCATTTGCAGGTTTGGCGTGTGAAGGGCCAGGAAAAGATTATTCTTCAAGCTTCTGATCAGTCAAAATTTTATAGTGGAGATTGCTACATCTTTCAGTATACATATCCTGGAGAGGATAAAGAAGATTGTCTTATTGGAACGTGGATTGGAAAGAATAGTGTTGAGGAAGAACAAGCTTCAGCTAACTCATTAGCAAGCAAAATGATTGAGTCAATGAAGTTTCTTGCTTGCCAGGCTCGTATATATGAAGGCAATGAACCAGTTCAATTTTATTCTATCCTCCAAAGCTTAATTGTTTTTAAGGGTGGGCTTGGTGAAGGATACAAGACTTACATTGCTGGAAAAGAAATTCCTGATGAGACATACGATGAGAATGGTGTTGCATTATTCCGCATCCAAGGCTCTGGACCAGATAATATGCAAGCTATACAAGTTGAACCAGTTGCATCTTCCTTGAATTCTTCTTACTGTTACATACTTCATAATGGGCCAGCTGTCTTTACTTGGTCTGGAAACTCTACAACTGCAGAAGACCAGGAACTTGTTGAGAGGATGCTGGATTTGATAAAGCCAAATTTACAATCCAAACCACAGAGGGAAGGTTCCGAATCTGAACAGTTTTGGGATTTGTTAGGAGGAAAATCAGAATATCCCAGTCAAAAGATCCTTAGAGAGGCTGAAAGTGATCCTCACCTATTTTCTTGTCACTTTTCTAAAGGGAATTTAAAGGTGACAGAGGTATACAATTTCTCCCAGGATGATTTGATGACAGAAGACATTTTCATCTTGGATTGTCATTTGGAAATCTTTGTTTGGGTTGGACAGCAGGTTGACTCCAAAAGTAGAATGCAGGCTCTAACAATTGGCGAGAAATTTCTTGAGCATGATTTTCTTCTAGAAAAATTATCTCGTGTAGCTCCAATATATGTTATCATGGAAGGGAGTGAGCCACCTTTTTTCACGCGCTTCTTTAAATGGGATTCTGCAAAATCTGCAATGCTGGGAAACTCATTTCAAAGGAAGCTTACGCTTGTGAAAAGTGGGGGTGCTCCACTTTTGGATAAACCCAAACGTAGAACACCGGTATCTTATGGGGGAAGGTCAAGTAGTGTGCCAGATAAATCCCAACGTTCATCCCGCAGCATGTCTGTCAGTCCTGATCGTGTTCGTGTAAGGGGCAGGTCTCCAGCCTTTAATGCTCTGGCAGCTACTTTCGAGAATCCTAATGCTAGGAATCTTTCAACCCCGCCTCCAGTAGTTAGAAAGCTCTATCCAAAATCTGTGACACCAGATTCTGCAATACTGGCACCAAAATCTGCAGCCATAGCTGCACTTAGTTCTTCTTTTGAACAGCCACCTTCAGCACGAGAAACTATGATACCTCGGTCGCTTAAAGTGAGTCCAGTAATGCCAAAATCAAACCCTGATAAAATTGACAAGGAGAATTCTGTGAGCACTAGAGTTGAATCTCTTACCATACAGGAAGATGTGAAAGAGAATGAAGTTGAAGATGAGGAAGGTCTTGTGATTTATCCATTTGAACGCCTTAAAATAACAAGCACAGATCCTGTAACAAGTATTGATGTGACTAAGCGAGAGACTTATCTATCATCTGCCGAGTTCAAAGAGAAATTTGGGATGTCCAAGGATGCCTTTTACAAGTTGCCCAAATGGAAACAAAACAAACTCAAAATGGCCCTTCAGTTATTCTGA 2889 0.4147 MAVSMRDLDPAFQGAGQKAGLEIWRIENFNPVPVPKSSYGKFFTGDSYVILKTTASKSGAMRHDIHYWLGKDTSQDEAGAAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHPEAEKHKTRLFVCRGKHVVHVKEVPFARASLNHDDIFVLDTESKVFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCDVAAVEDGKLMADPETGEFWGFFGGFAPLPRKTAGDDDKATDSRPLKLLCIEKGQAEPVEADSLKRELLDTNKCYILDCGFEVFVWMGRNTSLDERKSASGVADELASGIDKLKPQIIRVIEGFETVMFRSKFDSWPQTADVTVSEDGRGKVAALLKRQGVNVKGLLKADPVREEPQPHIDCTGHLQVWRVKGQEKIILQASDQSKFYSGDCYIFQYTYPGEDKEDCLIGTWIGKNSVEEEQASANSLASKMIESMKFLACQARIYEGNEPVQFYSILQSLIVFKGGLGEGYKTYIAGKEIPDETYDENGVALFRIQGSGPDNMQAIQVEPVASSLNSSYCYILHNGPAVFTWSGNSTTAEDQELVERMLDLIKPNLQSKPQREGSESEQFWDLLGGKSEYPSQKILREAESDPHLFSCHFSKGNLKVTEVYNFSQDDLMTEDIFILDCHLEIFVWVGQQVDSKSRMQALTIGEKFLEHDFLLEKLSRVAPIYVIMEGSEPPFFTRFFKWDSAKSAMLGNSFQRKLTLVKSGGAPLLDKPKRRTPVSYGGRSSSVPDKSQRSSRSMSVSPDRVRVRGRSPAFNALAATFENPNARNLSTPPPVVRKLYPKSVTPDSAILAPKSAAIAALSSSFEQPPSARETMIPRSLKVSPVMPKSNPDKIDKENSVSTRVESLTIQEDVKENEVEDEEGLVIYPFERLKITSTDPVTSIDVTKRETYLSSAEFKEKFGMSKDAFYKLPKWKQNKLKMALQLF* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03945 962 Gene3D Severin 517 613 IPR029006 -
Phac9g03945 962 SMART VHP_1 927 962 IPR003128 GO:0003779|GO:0007010
Phac9g03945 962 FunFam Villin-like 1 613 734 - -
Phac9g03945 962 CDD gelsolin_S3_like 255 343 - -
Phac9g03945 962 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Phac9g03945 962 FunFam Villin-like 1 132 247 - -
Phac9g03945 962 SUPERFAMILY VHP, Villin headpiece domain 887 962 IPR036886 GO:0003779|GO:0007010
Phac9g03945 962 CDD gelsolin_S2_like 138 223 - -
Phac9g03945 962 MobiDBLite consensus disorder prediction 755 777 - -
Phac9g03945 962 CDD gelsolin_S5_like 517 608 - -
Phac9g03945 962 FunFam Gelsolin 6 131 - -
Phac9g03945 962 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 252 427 IPR036180 -
Phac9g03945 962 CDD gelsolin_S1_like 12 124 - -
Phac9g03945 962 PANTHER VILLIN 7 952 IPR007122 GO:0051015
Phac9g03945 962 Gene3D Severin 388 500 IPR029006 -
Phac9g03945 962 SUPERFAMILY Actin depolymerizing proteins 511 613 - -
Phac9g03945 962 CDD gelsolin_S6_like 621 720 - -
Phac9g03945 962 Gene3D Severin 248 355 IPR029006 -
Phac9g03945 962 MobiDBLite consensus disorder prediction 741 782 - -
Phac9g03945 962 FunFam Villin-like 1 900 962 - -
Phac9g03945 962 Pfam Villin headpiece domain 927 962 IPR003128 GO:0003779|GO:0007010
Phac9g03945 962 SUPERFAMILY Actin depolymerizing proteins 137 238 - -
Phac9g03945 962 Gene3D Severin 614 733 IPR029006 -
Phac9g03945 962 FunFam Villin-4 385 519 - -
Phac9g03945 962 SUPERFAMILY Actin depolymerizing proteins 595 717 - -
Phac9g03945 962 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Phac9g03945 962 Gene3D Severin 7 132 IPR029006 -
Phac9g03945 962 SMART VILL_6 392 489 IPR007122 GO:0051015
Phac9g03945 962 SMART VILL_6 137 234 IPR007122 GO:0051015
Phac9g03945 962 SMART VILL_6 622 719 IPR007122 GO:0051015
Phac9g03945 962 SMART VILL_6 19 117 IPR007122 GO:0051015
Phac9g03945 962 SMART VILL_6 519 606 IPR007122 GO:0051015
Phac9g03945 962 SMART VILL_6 252 344 IPR007122 GO:0051015
Phac9g03945 962 MobiDBLite consensus disorder prediction 858 878 - -
Phac9g03945 962 FunFam Gelsolin 520 612 - -
Phac9g03945 962 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Phac9g03945 962 PRINTS Gelsolin family signature 673 692 IPR007122 GO:0051015
Phac9g03945 962 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Phac9g03945 962 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Phac9g03945 962 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Phac9g03945 962 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Phac9g03945 962 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Phac9g03945 962 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Phac9g03945 962 Gene3D Villin headpiece domain 900 962 IPR036886 GO:0003779|GO:0007010
Phac9g03945 962 ProSiteProfiles Headpiece (HP) domain profile. 897 962 IPR003128 GO:0003779|GO:0007010
Phac9g03945 962 CDD gelsolin_S4_like 388 485 - -
Phac9g03945 962 Gene3D Severin 133 247 IPR029006 -
Phac9g03945 962 Pfam Gelsolin repeat 266 337 IPR007123 -
Phac9g03945 962 Pfam Gelsolin repeat 28 111 IPR007123 -
Phac9g03945 962 Pfam Gelsolin repeat 150 215 IPR007123 -
Phac9g03945 962 Pfam Gelsolin repeat 410 466 IPR007123 -
Phac9g03945 962 Pfam Gelsolin repeat 637 712 IPR007123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03945 Phac-Chr9 37956237 37969200 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03945 - - gmx:100808499 1792.32