Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03397 ATGACATCTAGTGGCAAATCCCTTTGCTATAATCTTCCAGTCCTAGAAGTGTTGTCCATGAATTCATCTTCATGTGCTTTGTACATTTTTCCCACAAAGGCATTAGCTCAAGATCAACTAAGAGCGTTGTTACACATGACAAAAGGATTTGATAATGACTTTAATATTGGTATATATGATGGTGATACTTCTCACAGTGAGAGGATGTGGCTCCGTGATAATTCTAGATTGTTGATCACAAATCCAGATATGTTACACATATCAATCTTGCCCCATCATCAACAGTTTAGTCGGATTTTATCAAACCTAAGGTTTGTGGTAATTGATGAAACTCATACTTACAAGGGAACATTTGGAAGTCACACTGCCCTTATCTTGAGGAGGCTAAAACGACTCTGTTCACATGTATATGGATCTGTTCCTTCTTTTGTTTTTTCTACTGCAACTTCTGCAAATCCTCGGGAGCATTCTATGGAACTTGCAAATTTATCTACGCTGGAGCTATTTCAGAATGATGGAAGTCCATCTACAAGGAAACTATTTGTCCTTTGGAACCCTGCTTTGCGTCCAAAAGCTATCATTAAAAAGCCTCAGTTTGCTATGGGTACTGATGAGTTGGCTGATGAAAGTGCTAATTTTGTTCGTTCAAGCCCAATTGTGGATGTTTCACGTCTTTTTGCAGAAATGGTTCAGCATGGTCTTCGCTGTATTGCATTTTGTAAATCACGGAAACTTTGTGAGCTTGTTTTATCCTACACCCGTGAGATTCTTCATGAGACAGCCCCGTGGCTGGTGGATTCCATATGTGCATATCGTGGTGGCTACATCGCAGAGGAAAGAAGAAAAATAGAGAGTTCATTTTTTGGTGGTAAAATACATGGTGTTGCGGCAACTAATGCTCTTGAGTTGGGCATTGATGTTGGAGAAATTGATGCCACTCTGCATCTAGGATTTCCTGGTAGTATTGCAAGCTTGTGGCAACAAGCTGGTAGAGGTGGGAGGAGAGATAAACCATCTCTTGCTGTCTATGTTGCATTCGGGGGCCCTCTGGATCAGTACTTCATGACACATCCCAATAAACTTTTTGAAAGACCAATTGAATGTTGTCATGTTGATTCTCAAAACAAGAAGATTCTTGAGCAACATTTGGTCTGTGCTGCTCATGAATACCCTCTATGTGTGAACTACGATGAACAATATTTTGGTCCTTGCTTGGAGAGTGTTATAATTTCTCTAAAAGCTAGTGGATACTTGAGTTCTGTTCTATCTTCTGATTCTTCTAGAATATGGAACTACATTGGCCCTGAGAAATTACCCTCACATGCAGTCAATATCCGAGCAATAGAAAATGTAAGATACAGTGTCATAGATCAGAAAAAAAATGAAGTCCTTGAAGAGATAGAGGAAAGCAAGGCATTCTTTCAGGTATATGAAGGTGCTGTGTATATGTGCCAGGGGAAAACCTATTTGGTTGAAAAATTAGATCTATCTAATAAAACTGCTTTCTGCAAAGAGGCTGATCTAAAGTATTATACAAAGACTCGAGATTACACTGATATTCATGTCATTGGGGGTAATGTTGCTTATCCACTCAAGGTAGAAACCAGCATGTTTCCAAAATCAAATGCCCGGGCTGATGTATGCAAAGTAACAACTACTTGGTTTGGTTTTTATCGTATTTGGAGAGGAAGCAATCAAATCTTTGATACTGTTGACCTCGCACTTCCTCATTACTCATACGAGTCACAGGCAGTTTGGGTTCCTGTGCCACTGCCAATAAAAGAAGCAGTAGTCAAGCAAAATTTTGATTTCCGTGGAGGTCTGCATGCTGCTTCACATGCAATTTTAAACGTAGTGCCTTTACATATCACATGCAACTTGTCTGACTTGGCTCCTGAATGTCCAAACCCTCATGATAGCCGATTTTACCCCGAAAGAATTCTAATATATGATCAACATCCCGGAGGATGTGGAATTTCAGTACAGGTTCAACCCTATTTCACAAAGTTCCTGGAAGCCGCACTAGAGCTTCTAACATGTTGCCGCTGCTCAGCGGAAGTGGGTTGCCCTAATTGTGTTCAGAGCTTTGTTTGCAATGAATATAACGAGGTTTTGCACAAGGATGCAGCCATCATGATCATTAAGGGTATTCTGGAGGCGGGAAACTAG 2169 0.4039 MTSSGKSLCYNLPVLEVLSMNSSSCALYIFPTKALAQDQLRALLHMTKGFDNDFNIGIYDGDTSHSERMWLRDNSRLLITNPDMLHISILPHHQQFSRILSNLRFVVIDETHTYKGTFGSHTALILRRLKRLCSHVYGSVPSFVFSTATSANPREHSMELANLSTLELFQNDGSPSTRKLFVLWNPALRPKAIIKKPQFAMGTDELADESANFVRSSPIVDVSRLFAEMVQHGLRCIAFCKSRKLCELVLSYTREILHETAPWLVDSICAYRGGYIAEERRKIESSFFGGKIHGVAATNALELGIDVGEIDATLHLGFPGSIASLWQQAGRGGRRDKPSLAVYVAFGGPLDQYFMTHPNKLFERPIECCHVDSQNKKILEQHLVCAAHEYPLCVNYDEQYFGPCLESVIISLKASGYLSSVLSSDSSRIWNYIGPEKLPSHAVNIRAIENVRYSVIDQKKNEVLEEIEESKAFFQVYEGAVYMCQGKTYLVEKLDLSNKTAFCKEADLKYYTKTRDYTDIHVIGGNVAYPLKVETSMFPKSNARADVCKVTTTWFGFYRIWRGSNQIFDTVDLALPHYSYESQAVWVPVPLPIKEAVVKQNFDFRGGLHAASHAILNVVPLHITCNLSDLAPECPNPHDSRFYPERILIYDQHPGGCGISVQVQPYFTKFLEAALELLTCCRCSAEVGCPNCVQSFVCNEYNEVLHKDAAIMIIKGILEAGN* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03397 722 SMART helicmild6 255 336 IPR001650 -
Phac9g03397 722 Gene3D - 1 170 IPR027417 -
Phac9g03397 722 SMART ultradead3 2 181 IPR014001 -
Phac9g03397 722 FunFam DEAD/DEAH box helicase 214 363 - -
Phac9g03397 722 Pfam Helicase conserved C-terminal domain 228 334 IPR001650 -
Phac9g03397 722 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 168 IPR014001 -
Phac9g03397 722 Pfam DEAD/DEAH box helicase 2 150 IPR011545 GO:0003676|GO:0005524
Phac9g03397 722 CDD SF2_C_Hrq 181 345 - -
Phac9g03397 722 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 221 379 IPR001650 -
Phac9g03397 722 CDD DEXHc_Hrq1-like 2 160 - -
Phac9g03397 722 PANTHER ATP-DEPENDENT HELICASE HRQ1 1 721 - -
Phac9g03397 722 Gene3D - 214 389 IPR027417 -
Phac9g03397 722 Pfam MrfA Zn-binding domain 611 693 IPR018973 -
Phac9g03397 722 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 354 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03397 - - gmx:100819522 1360.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g03397 9 33373212 33385800 Phac9g03397 9 33373212 33385800 ECH