Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g03239 ATGGCGAAGAAAGAGATGGATGTTGTGAAGGGTTTGGACTTGCAAAGGTACATGGGTCGATGGTACGAGATTGCTTCATTCCCTTCGTTTTTTCAGCCAAGGAATGGTGAGAACACGAGAGCCACATATACCCTTAACAGTGAGGGGACTGTGCATGTGCTGAACGAGACATGGAGCGATGGAAAGAGAAGCTCCATAGAGGGTACTGCTTTCAAGGCTGACCCAAAAAGTGATGAAGCCAAGTTGAAGGTGAAATTTTATGTTCCACCCTTCTTGCCCATCATCCCTGTCACTGGCAACTACTGGGTCCTCTTTGTTGATGATGATTATCAGTATGCTTTGGTTGGCGAACCAACCAGGAAATACCTTTGGATTCTAAGCAGGAATACCCAAATAGATGAGGAGATCTACAAGCAGCTTGTTGAGAGAGCCAAGGAGGAAGGATATGATGTGAGCAAACTCCACAAGACTCCACAGAGTGATCCTCCTCCACTAGGGGAAGAAGGACCCAAAGACACCAAAGGCATTTGGTGGATCAAATCCATTTTTGGGAAATAG 558 0.4606 MAKKEMDVVKGLDLQRYMGRWYEIASFPSFFQPRNGENTRATYTLNSEGTVHVLNETWSDGKRSSIEGTAFKADPKSDEAKLKVKFYVPPFLPIIPVTGNYWVLFVDDDYQYALVGEPTRKYLWILSRNTQIDEEIYKQLVERAKEEGYDVSKLHKTPQSDPPPLGEEGPKDTKGIWWIKSIFGK* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g03239 185 CDD lipocalin_Blc-like 9 157 IPR047202 -
Phac9g03239 185 Pfam Lipocalin-like domain 12 159 IPR000566 -
Phac9g03239 185 SUPERFAMILY Lipocalins 5 165 IPR012674 -
Phac9g03239 185 ProSitePatterns Lipocalin signature. 11 24 IPR022272 -
Phac9g03239 185 PRINTS Bacterial lipocalin signature 12 26 IPR002446 -
Phac9g03239 185 PRINTS Bacterial lipocalin signature 121 132 IPR002446 -
Phac9g03239 185 PRINTS Bacterial lipocalin signature 148 158 IPR002446 -
Phac9g03239 185 PRINTS Bacterial lipocalin signature 49 58 IPR002446 -
Phac9g03239 185 PANTHER APOLIPOPROTEIN D 4 170 - -
Phac9g03239 185 PIRSF Lipocalin_ApoD 1 170 IPR022271 -
Phac9g03239 185 Gene3D - 1 162 IPR012674 -
Phac9g03239 185 MobiDBLite consensus disorder prediction 151 172 - -
Phac9g03239 185 FunFam Temperature-induced lipocalin 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g03239 Phac-Chr9 31960694 31962188 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g03239 K03098 - csav:115695695 346.665