Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02863 ATGGGCGGATCAATTTCAAAACGAAGGAGTTCTAGGCAACGTTCGTCCTCAAATTTTTTCCCTCGGTATCAATCGCCTTATTTGCCACAAAGCCAAGATCAAGGGTCTGTGAGGCATTACGGGTATTCATCCCAAAGCAATGGTGGTGGTCCTGCTCCAGAGCAAGGAAAGAGATCAGATGGGAAGTATTCAAGGATAGGTGATAATTATAAGAGCTTGGACCAGGTAACTGAAGCTTTAGCAAATGCTGGCCTAGAATCTTCTAATCTCATTGTTGGTATTGATTTTACCAAGAGCAATGAGTGGACAGGTGCAAGGTCATTTCAAAGGAGATGCCTGCATCACATTGGTCATGAACAAAATCCGTATGAACAAGCTATATCTATCATTGGGAAAACACTATCATCCTTTGATGAGGATAACTTAATTCCCTGTTTTGGTTTCGGAGATGCATCAACACATGATCAAGAAGTTTTTAGTTTCTATCCTGATGAGAGGTTTTGTCAAGGATTTGAAGAAGTGTTGGCACGATATAGGGAATTGGTCCCTCAATTAAAGCTTGCAGGACCAACATCATTTGCTCCAGTCATTGAGATGGCAATCACTATAGTCGAGCAAAGTGGAGGCCAATACCACGTCTTAGTGATTATAGCTGATGGGCAGGTGACGAGAAGTGTTGACACTGAGCATGGGCAGTTGAGTGCACAAGAAAAGAAAACTGTAGAAGCTATTGTGAAAGCTAGTGAATATCCCTTGTCAATCATATTAGTTGGAGTTGGAGATGGGCCGTGGGATATGATGAAACAATTTGACGATAACATCCCTGCCCGAGCATTTGATAATTTCCAGTTTGTGAATTTCACAGAAATAATGTCGAAGAACATGGATCGGTCCAGAAAGGAAACTGAGTTTGCACTGGCTGCCTTGATGGAAATACCCTACCAGTACAAGGCAACACTAGAGCTTAATACATTGGGCACTCGAAGCGGGAAAGATGTTGACAGGGTTCCTCTGCCACCCCCTCTATATGGTGCAGCATCTTTCAATTCCCCGAAAACATCCCGTCAGAACAGTTTTCGTCCCAGTGCACCATCTAGCAGACATGATGTTCGTACGAATCCTCCCGCAACTTCTGCTTCTGATAATCAGGTTTGTCCCATTTGCCTCACCAATCCTAAGGATATGGCTTTTGGTTGCGGGCATCAGACATGCTGTGAGTGTGGACAAGATCTTGAATTGTGCCCCATTTGCAGGAGTACCATTGATACTAGAATAAAACTTTATTAG 1287 0.4328 MGGSISKRRSSRQRSSSNFFPRYQSPYLPQSQDQGSVRHYGYSSQSNGGGPAPEQGKRSDGKYSRIGDNYKSLDQVTEALANAGLESSNLIVGIDFTKSNEWTGARSFQRRCLHHIGHEQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYPDERFCQGFEEVLARYRELVPQLKLAGPTSFAPVIEMAITIVEQSGGQYHVLVIIADGQVTRSVDTEHGQLSAQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMKQFDDNIPARAFDNFQFVNFTEIMSKNMDRSRKETEFALAALMEIPYQYKATLELNTLGTRSGKDVDRVPLPPPLYGAASFNSPKTSRQNSFRPSAPSSRHDVRTNPPATSASDNQVCPICLTNPKDMAFGCGHQTCCECGQDLELCPICRSTIDTRIKLY* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02863 428 Pfam Zinc finger, C3HC4 type (RING finger) 382 423 - -
Phac9g02863 428 MobiDBLite consensus disorder prediction 1 52 - -
Phac9g02863 428 MobiDBLite consensus disorder prediction 342 380 - -
Phac9g02863 428 SUPERFAMILY vWA-like 88 271 IPR036465 -
Phac9g02863 428 Gene3D von Willebrand factor, type A domain 105 293 IPR036465 -
Phac9g02863 428 PANTHER COPINE FAMILY PROTEIN 1 27 405 - -
Phac9g02863 428 SMART VWA_4 87 290 IPR002035 -
Phac9g02863 428 MobiDBLite consensus disorder prediction 347 380 - -
Phac9g02863 428 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 363 428 IPR013083 -
Phac9g02863 428 MobiDBLite consensus disorder prediction 1 66 - -
Phac9g02863 428 ProSiteProfiles Zinc finger RING-type profile. 385 418 IPR001841 -
Phac9g02863 428 Pfam Copine 112 326 IPR010734 -
Phac9g02863 428 SUPERFAMILY RING/U-box 379 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02863 Phac-Chr9 27419699 27424436 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02863 K16280 - gmx:100809850 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02863 9 27419699 27424436 Phac9g02863 9 27419699 27424436 ECH