LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac9g02857	ATGAATACTCAAGCCAAAACCTATTTCCCTCCCACTGAGCTTTCTGATATCTGCAGCCATTTTAGCAACATGAGTAGCCACACTCGCCAGCTAACAGCTCCCCCTAAGATGCACCAAAGGAAGGAGCGACGCATGTTCTCCACTTCTGATGACAGTGCCATGACCAAGCAAGTTCAGGCCACACATGCCCCTGATGGCCGTGAAATTGATGTCAAACCTATTCTACAAATCGTGGATGAAATTCTGGTTCGGTTTATTGCTCGCACTGTTGAGGGTTATGAAGTGAAAAGAGACCAAGATGCATTGGAGATGACTGCTGTTCTGGCTGAATTTGACATGCTTGACTCGCTGGCTTACATCATAAACAAAATTTCGTGTGAGCTATCATGCAAATGCTCGGGAGGTGGAGATGCACATTCATCGACGATGGTGTTACTGGGCTACATGTCTAGCTATGCATGGCATGCGAAAGTTGTGCTAACCTTAGCAGCCTTTGCTGTGATTTTTGGAGAGTTTTGGCTTGTTGCTCAGTTGAGTGCTGAAAATACTCTTGCCAAGTCTGTGGCCCTCCTCAAGCAACTGCCAGATCTTGCTGAGAATTTCATGTCCTTGAAGCCCCATTTTGAAGCACTCATTAGGCTCGTGAAGGCTGCCATGGAAGTAACCACCTGCATCGTTCAATTCAAGGAGCTTCCATCTGAATACATTTCAGAGGACACACCTCCCATGTCTGTTGCCAGTACTCACATTCCTATTGCTTCCTATTGGGTCATCAGAAGTATTGTGGCTTGTGCCTCTCAAATTGCTAGTCTCATAGGCACAAGAAATGAGTCCATTTCATCTACCACTGAGGCATGGGAATTATCTAGTCTTGCTCACAAAGTTACTAGTATTCATGAGCACCTAAAGAACCAACTGATTCTTTGCTACCAATATATAGATGACAAGAGGCATATAGAGGCCTTCCACAATCTGACACGTCTTTTTGAGACAGTCCATGTGGACAACATGAAAATTCTGAGAGCACTGATATATGCAAAGGATGATATCCTTCCACTTGTGGATGGAACTACAAAATCAAGGGTTAGTCTGGAGGTACTAAGGAGGAAACATGTGTTGCTGCTCATATCAGATCTTGATCTTTCACAAGAAGAGATCCTGGTACTTGATAATTTGTACAAAGATGCACGAGCGAGGGGTGACACACACTATGAGATGGTTTGGATCCCAGTTGTAGACAAAGCGGTCTGGAATGAGGTGAACAAACAGAAGTTTGAGTATTTGCAGTCATTGATGGCATGGTACAGTGTCTGTGATCCTTTCATCATTGAACCATCAGCAGTTAAGTACATCAAAGAAGTGTGGAATTTCTCAAAGACCGCTATTCTAGTGGCCCTTGATCCACAAGGCAGATTGTCCTCCCCTAATGCCGTCCATATGATATGGATTTGGGGCAATTTGGCCTTCCCCTTCACAAGTGAGAAAGAAGAATCATTGTGGAAGCAAGAGATTTGGAGCCTTGAGCTGCTTATCGATGGCATTGATCCTACAGTTCTAGAATGGATGGCAGACGGAAAACTGGTATGCCTGTATGGAGGTGAAGACCTGGAGTGGATTGAGAAATTCACAGCAACAGCATTGAGTGTGGCAAAAGCTGGGAAGTTCCAGCTGGAGATGGTGTACGTGGGAAAGAGCAACGCGAAGGAGCGGATGCAGAAGATGATAAAAACGTTCAACACGAGAAAGTTCAGTTACTTTTGGCCTAACGTGACGTCCATTTGGTTCTTCTGGACCCGTTTGGAGAGCATGCTGTACTCCAAGTTGCAGCATGGAAGGACGGTGGAAAACGACGAGATCATGAGCGAGGTGATGACTGTGCTGAGCTTCGACGGCAGTGATCGAGGGTGGGCGATTTTCTGCAGGGGCGCCACTGAAATGGCCAGAGCCAAGGGGGACAGTGCTCTGGTATGCTTGCAGGACTTTGACAAGTGGAAGGATAGAGTTGAGGAAGAAGGTGTGGTGCAAGCAATGAACGATTATCTCAACAAAAACAAACCCCCACATCACTGCAATCGCTTGATCCTTCCTGGGAGCACTGGTGGCATACCCCAGAAAGTTGTGTGTGCTGAATGTGGACGCCAAATGGAGAAATACTTCATGTATCGTTGTTGTGTGGAGTAA	2181	0.4594	MNTQAKTYFPPTELSDICSHFSNMSSHTRQLTAPPKMHQRKERRMFSTSDDSAMTKQVQATHAPDGREIDVKPILQIVDEILVRFIARTVEGYEVKRDQDALEMTAVLAEFDMLDSLAYIINKISCELSCKCSGGGDAHSSTMVLLGYMSSYAWHAKVVLTLAAFAVIFGEFWLVAQLSAENTLAKSVALLKQLPDLAENFMSLKPHFEALIRLVKAAMEVTTCIVQFKELPSEYISEDTPPMSVASTHIPIASYWVIRSIVACASQIASLIGTRNESISSTTEAWELSSLAHKVTSIHEHLKNQLILCYQYIDDKRHIEAFHNLTRLFETVHVDNMKILRALIYAKDDILPLVDGTTKSRVSLEVLRRKHVLLLISDLDLSQEEILVLDNLYKDARARGDTHYEMVWIPVVDKAVWNEVNKQKFEYLQSLMAWYSVCDPFIIEPSAVKYIKEVWNFSKTAILVALDPQGRLSSPNAVHMIWIWGNLAFPFTSEKEESLWKQEIWSLELLIDGIDPTVLEWMADGKLVCLYGGEDLEWIEKFTATALSVAKAGKFQLEMVYVGKSNAKERMQKMIKTFNTRKFSYFWPNVTSIWFFWTRLESMLYSKLQHGRTVENDEIMSEVMTVLSFDGSDRGWAIFCRGATEMARAKGDSALVCLQDFDKWKDRVEEEGVVQAMNDYLNKNKPPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYRCCVE*	727

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac9g02857	726	PANTHER	PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE	32	725	IPR039299	GO:0010088
	Phac9g02857	726	Pfam	Sieve element occlusion C-terminus	495	724	IPR027944	-
	Phac9g02857	726	Pfam	Sieve element occlusion N-terminus	49	333	IPR027942	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac9g02857	Phac-Chr9	27362887	27367725	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac9g02857	-		-	gmx:100811452	1343.18

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phac9g02857	9	27362887	27367725	Phac9g02857	9	27362887	27367725	ECH