Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02828 ATGCTCACTCCCCCAATGCTCAAATCATCCTTCACTCCCCTTTTCTGGGTGCTAAACCCTAAACCCAAATCTCAAAAACTTCCCTCCCACCTATTCACCAAAACTTTCTTCACTAACACCACGCCACCCGTTCGACACAATGCCTCTCTCAACCTCCCCACCCCACCACCCGCTTCCTCCGCCTACATCCACCTCCCTTTCTGCCGGAAACGCTGCCACTATTGCGACTTCCCCGTCGTAGCTCTCGGCTCCGCCTCAACCCAAACCCACCACGACCCTCGCGTCTCCAACTACATCCACTGGCTCTGCCGGGAAATCACCGCCACCAAAGTGGATCAACCCGCTTCCACCACGCCCCTCCAGACTGTCTACTTTGGCGGTGGAACACCCTCGCTGGTGCCTCCTGCGATGGTTTCATCCGTTTTGGAGGCTCTGAGGGTGAAGTTTGGGCTTTGTGAGGACGCGGAAATATCGATGGAGATGGACCCCGGCACCTTTGATGCTGAGAAGATGAGGGAGATGATGGCGTTGGGGGTGAATAGAGTGTCTTTGGGAGTGCAGGCGTTTCAGGAGGAGCTGTTGAGAGCGTGTGGCAGGGCACATGGGGTGCAAGAGGTTCATGAGGCTATTGGTGTTGTGAAGTCGTGTGGGGTTGAGAATTGGAGTGTGGATCTCATAGCTTCGTTGCCTCATCAGAGTTGTGAGATGTGGGAGGAAAGTTTAAGGCTCACCATTGAGTCGCAACCTTCTCATGTGTCTGTTTATGACTTGCAAATTGAGCAAGGAACAAAATTTGGACGATTGTACTCACCAGGGGAATTTCCGATGCCTTCTGAAGCACAATCGGCTGAGTTCTATAAGATGGCTTCAAGAATGCTTTCTGATGCGAATTACAACCATTATGAAATCAGCAGCTACTGCAAGAGTGGGTACGAGTGCAAACACAACTTTGTCTACTGGAAGAACGAGCCTTTCTATGCTTTTGGCCTTGGCTCTGCCAGTTTTGTTGGTGGGTTGAGGTTTTCAAGACCAAGGAAGGTCAATGATTACATCAATTTTGTGCAGAATCTGGAAAATGGATTAGTAGATAGCTCTAGTGGTGATGGTAACATTCATGGCAAGGACACCGCCATGGATGTGGTGATGCTGTCCCTAAGAACTGCACAAGGCCTAGACTTGAAGAGTTTCCAAGAATCATTTGGCAGCTCTGTTGTTTTGTCTTTGCTAGAGGCTTATAAGCCTTATGTTGAGAGTGGGCTTGTGGTTTGTTTGGACGAGCATAGGAGAACCATTATAGTAGATGACCTTAACAATTCTTTTTTGTATAAAACTAACACAGAAAAGAGGGTGGCTTACATAAGGCTAAGTGATCCAGAAGGTTTCCTCTTGTCAAATGAGTTGATAGCCCTTGCTTTTGGGGTTATTGACTCTTGGATGGATTGCCCTCCATATCAAGAAGCAAAAGCCGCCACTTGA 1476 0.4878 MLTPPMLKSSFTPLFWVLNPKPKSQKLPSHLFTKTFFTNTTPPVRHNASLNLPTPPPASSAYIHLPFCRKRCHYCDFPVVALGSASTQTHHDPRVSNYIHWLCREITATKVDQPASTTPLQTVYFGGGTPSLVPPAMVSSVLEALRVKFGLCEDAEISMEMDPGTFDAEKMREMMALGVNRVSLGVQAFQEELLRACGRAHGVQEVHEAIGVVKSCGVENWSVDLIASLPHQSCEMWEESLRLTIESQPSHVSVYDLQIEQGTKFGRLYSPGEFPMPSEAQSAEFYKMASRMLSDANYNHYEISSYCKSGYECKHNFVYWKNEPFYAFGLGSASFVGGLRFSRPRKVNDYINFVQNLENGLVDSSSGDGNIHGKDTAMDVVMLSLRTAQGLDLKSFQESFGSSVVLSLLEAYKPYVESGLVVCLDEHRRTIIVDDLNNSFLYKTNTEKRVAYIRLSDPEGFLLSNELIALAFGVIDSWMDCPPYQEAKAAT* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02828 491 SFLD HemN-like, clustered with heat shock genes 59 425 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Phac9g02828 491 Gene3D tm_1862 like domain 66 295 IPR023404 -
Phac9g02828 491 Pfam Radical SAM superfamily 63 243 IPR007197 GO:0003824|GO:0051536
Phac9g02828 491 ProSiteProfiles Radical SAM core domain profile. 53 296 IPR007197 GO:0003824|GO:0051536
Phac9g02828 491 NCBIfam radical SAM family heme chaperone HemW 60 422 IPR004559 GO:0004109|GO:0005737|GO:0006779|GO:0051539
Phac9g02828 491 SFLD anaerobic coproporphyrinogen-III oxidase like 59 425 - -
Phac9g02828 491 SUPERFAMILY Radical SAM enzymes 48 428 - -
Phac9g02828 491 PANTHER COPROPORPHYRINIGEN III OXIDASE 49 477 IPR034505 -
Phac9g02828 491 CDD Radical_SAM 68 286 - -
Phac9g02828 491 SMART MiaB 58 288 IPR006638 GO:0003824|GO:0051536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02828 - - gmx:100779022 840.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02828 9 27001465 27003361 Phac9g02828 9 27001465 27003361 ECH