Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02629 ATGGCAGCTGAGCTAGTCAATGGTGCAACAAGCGAGAAACTGGCTGAAACTGATTGGACAAAAAATATTGAAATCTGTGAGCTAGTTGCTCATGATAGAAGGCAAGCTAGAGATGTTGTTAAAGCTATAAAAAAGAGACTAGGAAGCAAACACCCTGATACTCAACTTTATGCTGTCCTGCTGCTGGAAATGTTGATGAACAATATTGGAGAGCATATTCATGGGCTGGTGATTGATACTGGGATTATTCCTATTCTAGTAAAAATTGTGAAGAAAAAATCTGATTTGGCTGTGAGGGAGAGGATCTTTCTCCTACTAGATGCCACACAAACATCCCTTGGTGGTGCATCTGGAAAGTTTCCACAGTATTATAATGCATATTATGAGTTGGTGAGTGCCGGAGTGCAGTTTTCTCAAAGGGATCAAGTGGTCCAATCAGAACATCCCAGTTCACAACCTAATAGGACTAGTAATGTACCAAACAGGGAGCAGGCCGCACCTAGACATGAAGCGGTTTCTCAGCAAGCTGAGTCCCAGACTGTCCCTGAATCTAGCATTATTCAAAAGGCTAGCAATGCATTAGAAGTACTAAAAGAGGTCCTGGATGCTGTTGATGCTCAAAATCCTCAGGGAGCAAGGGATGAATTCACCCTAGATCTTGTAGAACAATGTTCTTTTCAAAAGCAAAGGGTTATGCATCTTGTGATGGCTTCTCGAGATGAAAGGATAGTTTCTCGGGCAATTGAATTGAATGAACAACTTCAGAAAGTTCTTGCAAGACATGATGACCTTCTTGCTGGCAGAGTTACAACAACCGCAACTCGGTTTGACCATGAGGAAGGGGAGGAAGAAGAGGAGCCTGAGCAGTTAGTCCGAAGATTACGTAAGGGAAAGGCTTGTGCAAGACCTGAAGATGAGGAGACAGAAACCGACATCCCTCCCTTGGGTTTACTTGGTGAGAGACTCAATCGTCCACTAATACGACCACTCTCAATAGAACCGCAATCTCGAGATGCTGGAACTCGATCTCCACCTGTTGTGATCCTGCCATCTCGTGAAGCTGACACTCGATCTCCACCTGTTGTGATTCCACCGCCACGGCCGAAACAGAACGGCGATGTTCCTCATCATGTGGCAATTCCACCACCACCTGCAAAGCATGTTGAGAGGGAGAAGTTTTTTCAGGAAAACAAGGATGGGTCTAATTTGTCTGGTCACATGAGAGGCCTCTCCTTGCATAGTCGTAATGGCAGCAGCTCTCACAGTGGAAGCTTTGATTTTAGTGAATGA 1290 0.4473 MAAELVNGATSEKLAETDWTKNIEICELVAHDRRQARDVVKAIKKRLGSKHPDTQLYAVLLLEMLMNNIGEHIHGLVIDTGIIPILVKIVKKKSDLAVRERIFLLLDATQTSLGGASGKFPQYYNAYYELVSAGVQFSQRDQVVQSEHPSSQPNRTSNVPNREQAAPRHEAVSQQAESQTVPESSIIQKASNALEVLKEVLDAVDAQNPQGARDEFTLDLVEQCSFQKQRVMHLVMASRDERIVSRAIELNEQLQKVLARHDDLLAGRVTTTATRFDHEEGEEEEEPEQLVRRLRKGKACARPEDEETETDIPPLGLLGERLNRPLIRPLSIEPQSRDAGTRSPPVVILPSREADTRSPPVVIPPPRPKQNGDVPHHVAIPPPPAKHVEREKFFQENKDGSNLSGHMRGLSLHSRNGSSSHSGSFDFSE* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02629 429 Pfam VHS domain 5 111 IPR002014 GO:0035091|GO:0043130
Phac9g02629 429 MobiDBLite consensus disorder prediction 141 184 - -
Phac9g02629 429 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Phac9g02629 429 MobiDBLite consensus disorder prediction 383 397 - -
Phac9g02629 429 Gene3D - 175 274 IPR038425 -
Phac9g02629 429 SUPERFAMILY ENTH/VHS domain 4 137 IPR008942 -
Phac9g02629 429 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Phac9g02629 429 MobiDBLite consensus disorder prediction 330 429 - -
Phac9g02629 429 Coils Coil 187 207 - -
Phac9g02629 429 MobiDBLite consensus disorder prediction 359 382 - -
Phac9g02629 429 MobiDBLite consensus disorder prediction 141 163 - -
Phac9g02629 429 Gene3D - 2 136 IPR008942 -
Phac9g02629 429 Pfam GAT domain 192 267 IPR004152 GO:0035091|GO:0043130
Phac9g02629 429 CDD VHS 2 130 - -
Phac9g02629 429 CDD GAT_GGA-like_plant 186 264 - -
Phac9g02629 429 SUPERFAMILY GAT-like domain 144 268 - -
Phac9g02629 429 MobiDBLite consensus disorder prediction 298 317 - -
Phac9g02629 429 MobiDBLite consensus disorder prediction 398 429 - -
Phac9g02629 429 PANTHER TOM1-LIKE PROTEIN 1 415 IPR044836 GO:0035091|GO:0043130|GO:0043328
Phac9g02629 429 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02629 Phac-Chr9 24740370 24747033 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02629 - - pvu:PHAVU_009G157500g 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02629 9 24740370 24747033 Phac9g02629 9 24740370 24747033 ECH