Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02510 ATGGATTCAAGTTCATCCCCGGAATTCGAATATTTGTTTAAGTTGTTGATGATTGGGGACTCAGGTGTTGGCAAGAGTAGTCTCCTCCTCTGTTTCACCTCTGATTCCTTTGAAGATCTTTCTCCGACAATTGGGGTTGATTTTAAGGTCAAGTATTTGAACATGGAAGGGAAAAAGCTGAAGCTTGCCATTTGGGACACAGCTGGTCAAGAGAGATTCAGAACATTGACGAGTTCTTACTACCGAGGTGCACAAGGGATCATTATGGCTTATGATGTAACTCGGCGGGAAACGTTTACGAATCTCGCTGATATATGGTCAAAGGAAATAGAACTTTATTCAACAAATTCGGAATGCATCAAAATGCTTGTTGGAAACAAAGTGGATAAGGAAGGTGATAGAGTTGTGACCAAGAAAGAGGGAATAGACTTTGCCAGGGAATGTGGTTGCCTATTTATTGAATGCAGTGCTAAAACTCGAGTTAACGTACAACAATGCTTTGAAGAGCTTGTTCTGAAGATTCTGGATACACCTAGCCTCTTAGCAGAGGGCTCTAAGAGCAATAAAAAGAACATATTTAAGGACAAGCCATCCAACAATGCCACAAGTAGTTGTTGCTGA 621 0.4106 MDSSSSPEFEYLFKLLMIGDSGVGKSSLLLCFTSDSFEDLSPTIGVDFKVKYLNMEGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRETFTNLADIWSKEIELYSTNSECIKMLVGNKVDKEGDRVVTKKEGIDFARECGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKSNKKNIFKDKPSNNATSSCC* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02510 206 CDD Rab18 13 174 - -
Phac9g02510 206 Gene3D - 6 206 IPR027417 -
Phac9g02510 206 FunFam Ras-related protein RABC1 6 206 - -
Phac9g02510 206 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 190 IPR027417 -
Phac9g02510 206 ProSiteProfiles small GTPase Rab1 family profile. 8 206 - -
Phac9g02510 206 SMART rab_sub_5 13 177 - -
Phac9g02510 206 PRINTS Transforming protein P21 ras signature 13 34 - -
Phac9g02510 206 PRINTS Transforming protein P21 ras signature 152 174 - -
Phac9g02510 206 PRINTS Transforming protein P21 ras signature 53 75 - -
Phac9g02510 206 PRINTS Transforming protein P21 ras signature 117 130 - -
Phac9g02510 206 PRINTS Transforming protein P21 ras signature 35 51 - -
Phac9g02510 206 ProSiteProfiles small GTPase Ras family profile. 4 206 IPR001806 GO:0003924|GO:0005525
Phac9g02510 206 SMART rho_sub_3 15 177 IPR001806 GO:0003924|GO:0005525
Phac9g02510 206 ProSiteProfiles small GTPase Rho family profile. 6 175 - -
Phac9g02510 206 SMART ran_sub_2 18 202 - -
Phac9g02510 206 SMART ras_sub_4 10 177 - -
Phac9g02510 206 Pfam Ras family 14 175 IPR001806 GO:0003924|GO:0005525
Phac9g02510 206 NCBIfam small GTP-binding protein domain 11 169 IPR005225 GO:0005525
Phac9g02510 206 PANTHER RAS-RELATED PROTEIN RAB 12 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02510 Phac-Chr9 23701626 23707075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02510 14 167 EF-hand Containing Proteins AT5G27540 25.625 7.90e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02510 K07910 - gmx:100779729 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04091 2 40165998 40170350 Phac9g02510 9 23701626 23707075 PCT