Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02467 ATGCTGATCTCTGATGAGGGAGATTGTGATGTGTTTTTTGACTCAGTGGATTGTTTTTCACCAATCCAAGGGTCTGCTCCGACAGAAGAAGAGTTGGGTTATGAGATTTGGGTGAATGAGCCTGTGAGTGTGAAGGAAAGGAGGGGAAAGTTTTTGCAGGGGATGGGGTGGGATGATGGTTCTTCCAAGGTTTGTGCTCAAGAGAATAATATGATGAATTCTGATAACTCATCAGTGAGATTTGTACTGGAGAGGACCAGCGATAGTGGGGCAGTTTCAAATACTTCTTGTTGTATTTTGCCTTATGATCAGGTTTCTGAGGAGTTGGTTCTCTCGGGAAGGGAAACAACTTCTGAGGCACAAGACTTGTTTGACGATCAGAAAGGAGGTCCCCAAGATAAACCAGATGCAAGTTCAGAAGAGAAGATTTATGAGGTTTCTTTTACAGATGAAGAGATTAGACATCGAAAAGCTGAGGCTCGAGAGAAGAAAAGTTGGTGGCAGCACTTTATGAGCAACAAAAAAGGAGGTTGGGGTAAAATCAGTTCAAAATTGGATTCAGGGCCAAATAAAAGTCGTAGAATAAAAGTAAAGCAGAATAAGAAGAGGTGGATGGAGTTGAGTGCACTGTATATTGGGCAAGAGATTAGAGCTCACGAAGGCCTGATTTGGACTATGAAGTTTAGTCCCAATGGCCAATATCTGGCTAGTGGAGGTGAAGATGGTGTAATACGCATATGGCGTGTGACATCACTAGATACATCTAGTATCTGCTTCAATGCAGAAGACAGTGCTGTTAGAAAAGTGAAACGTGGCTCCTCTTTCTCTCAGAAGAAACACTCAAGTCAATCCTTCGCTGTTCTTCCTAACAAGATTTTGAAAGTCGAGGAATCACCATTGCATGAATTTTATGGTCACACCAGAGATGTCTTGGATTTGGCTTGGTCCAATTCAGATACTCTCCTTTCATCTTCTTCGGATAAAACTGTTCGCTTGTGGAAAATTGGTTGTAATCAATGTCTAAGTGTTTTCCATCACAAAGACTATGTGACTTGCATTCAGTTCAACCCCGTTGACGAAAATTTCTTCATCAGTGGTTCCATAGATGGCAAAGTCCGAATATGGGGGATAAATGAAGAGCGAGTTGTTGACTGGGCAGACATACGAGATGTGATTAGTGCTATAAGTTTCCGACCAGATGGACAAGGGTTTGTAGTTGGTTCCCTCACAGGCAATTGCCGCTTTTATGTTGTCTCAGGCAAACATTTCCAGCTTGATGCCCAAATTCGTGTCAATGGAAAGAAGAGAACATCTGGCAACAAGATTACAGGCATTCAGTTTTCTCAGAAAAACCATCAGAGAGTTATGATTACATCTGAAGATTCCAAAGTTAGAATATTGGAAGGCGTTGAACTTGTTCAAACATATAAAGGTCTTTCAAGGTCTGGAAGTCAGATGTCTGGTTCATTTACCTCTGGTGGAGAGCATATAATTTCAGTCGGAGGGGACTCTCGTGTGTATATTTGGAACTTCAATGACTTGGGAAATACTTCTCCCAAAAGTACAAAATCCAAGTATTCGTGTGAGTACTTTGCCTCTCAAGGGGTTACTATTGCAATACCTTGGTCTGGCATGACTACAGAACAAAGAGGTTCTGGCAAAGATTTTGCCCACTATTCTTCAGGAATGCAGCACCAACTAGAGGCTGCTCATGGTGTCAGGGAATCAGAACGTTTTTCTTTTGGAAGTTGGTTCTCCATTGATGGTACATGTCGGGGTTCTGTGACGTGGCCCGAAGAGAAGCTTCCTAGTTGGGATTTACCTCTTGCAGAAGTTGAATTTGATCACCAGAAGCCATGTATGAAAGATCCTTCCCATGAAAAATACGTATCAGAAACATGGGGACTATCAATTGTGACAGCAGGTTGTGATGGAACCATCAAGACATTCCACAACTTTGGACTTCCTATTAGGCTTTAG 1980 0.4212 MLISDEGDCDVFFDSVDCFSPIQGSAPTEEELGYEIWVNEPVSVKERRGKFLQGMGWDDGSSKVCAQENNMMNSDNSSVRFVLERTSDSGAVSNTSCCILPYDQVSEELVLSGRETTSEAQDLFDDQKGGPQDKPDASSEEKIYEVSFTDEEIRHRKAEAREKKSWWQHFMSNKKGGWGKISSKLDSGPNKSRRIKVKQNKKRWMELSALYIGQEIRAHEGLIWTMKFSPNGQYLASGGEDGVIRIWRVTSLDTSSICFNAEDSAVRKVKRGSSFSQKKHSSQSFAVLPNKILKVEESPLHEFYGHTRDVLDLAWSNSDTLLSSSSDKTVRLWKIGCNQCLSVFHHKDYVTCIQFNPVDENFFISGSIDGKVRIWGINEERVVDWADIRDVISAISFRPDGQGFVVGSLTGNCRFYVVSGKHFQLDAQIRVNGKKRTSGNKITGIQFSQKNHQRVMITSEDSKVRILEGVELVQTYKGLSRSGSQMSGSFTSGGEHIISVGGDSRVYIWNFNDLGNTSPKSTKSKYSCEYFASQGVTIAIPWSGMTTEQRGSGKDFAHYSSGMQHQLEAAHGVRESERFSFGSWFSIDGTCRGSVTWPEEKLPSWDLPLAEVEFDHQKPCMKDPSHEKYVSETWGLSIVTAGCDGTIKTFHNFGLPIRL* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02467 659 FunFam WD repeat-containing protein 44 200 542 - -
Phac9g02467 659 ProSiteProfiles Trp-Asp (WD) repeats profile. 216 257 IPR001680 GO:0005515
Phac9g02467 659 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 216 251 - -
Phac9g02467 659 SMART WD40_4 469 510 IPR001680 GO:0005515
Phac9g02467 659 SMART WD40_4 432 468 IPR001680 GO:0005515
Phac9g02467 659 SMART WD40_4 296 334 IPR001680 GO:0005515
Phac9g02467 659 SMART WD40_4 337 376 IPR001680 GO:0005515
Phac9g02467 659 SMART WD40_4 209 248 IPR001680 GO:0005515
Phac9g02467 659 SMART WD40_4 378 417 IPR001680 GO:0005515
Phac9g02467 659 Pfam WD domain, G-beta repeat 339 375 IPR001680 GO:0005515
Phac9g02467 659 Pfam WD domain, G-beta repeat 215 247 IPR001680 GO:0005515
Phac9g02467 659 Pfam WD domain, G-beta repeat 298 334 IPR001680 GO:0005515
Phac9g02467 659 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 343 378 - -
Phac9g02467 659 SUPERFAMILY WD40 repeat-like 212 649 IPR036322 GO:0005515
Phac9g02467 659 ProSiteProfiles Trp-Asp (WD) repeats profile. 303 343 IPR001680 GO:0005515
Phac9g02467 659 PANTHER WD REPEAT DOMAIN 44 10 656 IPR040324 -
Phac9g02467 659 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 303 335 - -
Phac9g02467 659 ProSiteProfiles Trp-Asp (WD) repeats profile. 343 385 IPR001680 GO:0005515
Phac9g02467 659 MobiDBLite consensus disorder prediction 119 140 - -
Phac9g02467 659 Gene3D - 205 541 IPR015943 GO:0005515
Phac9g02467 659 PRINTS G protein beta WD-40 repeat signature 321 335 IPR020472 -
Phac9g02467 659 PRINTS G protein beta WD-40 repeat signature 235 249 IPR020472 -
Phac9g02467 659 PRINTS G protein beta WD-40 repeat signature 363 377 IPR020472 -
Phac9g02467 659 MobiDBLite consensus disorder prediction 116 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02467 Phac-Chr9 23351608 23359692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g02467 300 421 Miscellaneous Gene Families AT5G08390 28.571 1.23e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02467 K20241 - gmx:100801576 1076.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02467 9 23351608 23359692 Phac9g02467 9 23351608 23359692 ECH