Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02453 ATGGCGACAAAAGCTTTGTCTTTCGCTCTGTCCTTCAATGACCTCACCAACTGCTTCTCTTCCAATCCGCCACGCGCCGCCGTCGCCAAAGTTTCCGTCTTTACCGTCAGATGCTCTTCGGGTAACCTCTCAATGGGTTCCCTCAGTAGTGGAGAAAGGCCTTGGAAAAACTCAGATGCTAGACTGGTGCTAGAAGATGGTTCAATTTGGAGAGCGAAATCATTTGGTGCTTCAGGGACACAAGTTGGCGAAGTTGTTTTCAATACATCACTGACAGGGTATCAGGAAATTTTGACAGATCCCAGTTATGCTGGCCAGTTTGTGCTGATGACAAATCCTCATATTGGGAATACTGGCGTTAATTTTGATGATGAGGAATCGATGCGGTGTTTCCTTGCTGGTCTTGTAATTAGAAGTTTGAGCATCAGTACCTCTAACTGGAGATGTGCGAAGTCTCTGGGTGATTACTTAGCTGAAAGGAATATCATGGGAATCTATGATGTTGATACTCGTGCAATCACACGCAGATTGCGGCAAGATGGCAGTCTTATTGGTGTCTTGAGCACGGACGATTCCAAAACAGATGAGCAATTGCTTCAGATGTCTAAGTCATGGGACATTGTTGGTGTTGATCTAATAAGTGGAGTATCATGCAAAAGTCCACATGAATGGGTTGATAAAACAAAGCAACAATGGGAGTTTAGTTCCGGTAAAGTGCCCGGAGAGACTTTCCATGTAGTTGCTTATGATTTTGGAATCAAGCATAATATTCTTAGACGCCTAGCTTCTTATGGCTGCAAAATCACTGTTGTGCCATCTACATGGCCAGCATCAGAAACTTTGAAGATGAAGCCAGATGGGGTTCTTTTCAGCAATGGTCCTGGAGATCCATCTGCTGTTCCGTACGCTGTTGAAACAGTAAAGAATATAATTGGAAAGGTGCCTGTTTTTGGAATTTGCATGGGCCATCAATTGCTTGGCCAGGCTTTAGGAGGGAAAACATTCAAGATGAAATTTGGTCACCATGGAGGAAATCATCCTGTTCGCAACCTTCAAACTGGCCATGTTGAAATTAGTGCTCAGAACCACAACTATGCTGTTGACCCTGCCACACTGCCGGAAGGGGTCAAGGTTACTCATATCAATCTCAATGATGGAAGTTGTGCCGGTCTTGCTTTCCCAGCACAGCAACTTATGTCTCTTCAATACCACCCTGAAGCATCCCCTGGGCCTCATGATTCGGACTACGGTGAGACACTTGGAACTTTCTGTTCATTAAAAATACAGAAAAAAAGGCTTGATATGATCATCAATCCATATGTGCTAGTCTTGAGAAATGTTAGGTTCATGAACTGA 1356 0.441 MATKALSFALSFNDLTNCFSSNPPRAAVAKVSVFTVRCSSGNLSMGSLSSGERPWKNSDARLVLEDGSIWRAKSFGASGTQVGEVVFNTSLTGYQEILTDPSYAGQFVLMTNPHIGNTGVNFDDEESMRCFLAGLVIRSLSISTSNWRCAKSLGDYLAERNIMGIYDVDTRAITRRLRQDGSLIGVLSTDDSKTDEQLLQMSKSWDIVGVDLISGVSCKSPHEWVDKTKQQWEFSSGKVPGETFHVVAYDFGIKHNILRRLASYGCKITVVPSTWPASETLKMKPDGVLFSNGPGDPSAVPYAVETVKNIIGKVPVFGICMGHQLLGQALGGKTFKMKFGHHGGNHPVRNLQTGHVEISAQNHNYAVDPATLPEGVKVTHINLNDGSCAGLAFPAQQLMSLQYHPEASPGPHDSDYGETLGTFCSLKIQKKRLDMIINPYVLVLRNVRFMN* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02453 451 Gene3D - 207 424 IPR029062 -
Phac9g02453 451 CDD GATase1_CPSase 246 416 IPR035686 -
Phac9g02453 451 PRINTS Glutamine amidotransferase superfamily signature 288 297 - -
Phac9g02453 451 PRINTS Glutamine amidotransferase superfamily signature 315 326 - -
Phac9g02453 451 PRINTS Glutamine amidotransferase superfamily signature 400 413 - -
Phac9g02453 451 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 245 433 - -
Phac9g02453 451 PANTHER CARBAMOYLTRANSFERASE FAMILY MEMBER 56 411 - -
Phac9g02453 451 PRINTS Anthranilate synthase component II signature 315 326 - -
Phac9g02453 451 PRINTS Anthranilate synthase component II signature 288 297 - -
Phac9g02453 451 PRINTS Anthranilate synthase component II signature 400 413 - -
Phac9g02453 451 Gene3D - 58 206 IPR036480 -
Phac9g02453 451 FunFam Carbamoyl-phosphate synthase small chain 57 206 - -
Phac9g02453 451 Pfam Glutamine amidotransferase class-I 249 416 IPR017926 -
Phac9g02453 451 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 285 299 - -
Phac9g02453 451 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 332 349 - -
Phac9g02453 451 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 246 260 - -
Phac9g02453 451 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 315 331 - -
Phac9g02453 451 PRINTS Carbamoyl-phosphate synthase protein GATase domain signature 357 368 - -
Phac9g02453 451 SMART CPSase_sm_chain_2 58 188 IPR002474 -
Phac9g02453 451 Hamap Carbamoyl-phosphate synthase small chain [carA]. 58 429 IPR006274 GO:0004088|GO:0006207|GO:0006541
Phac9g02453 451 FunFam carbamoyl-phosphate synthase small chain, chloroplastic 207 431 - -
Phac9g02453 451 SUPERFAMILY Class I glutamine amidotransferase-like 235 416 IPR029062 -
Phac9g02453 451 NCBIfam glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 60 416 IPR006274 GO:0004088|GO:0006207|GO:0006541
Phac9g02453 451 SUPERFAMILY Carbamoyl phosphate synthetase, small subunit N-terminal domain 59 204 IPR036480 -
Phac9g02453 451 Pfam Carbamoyl-phosphate synthase small chain, CPSase domain 62 186 IPR002474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02453 Phac-Chr9 23240708 23243197 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02453 K01956 - gmx:100806168 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02453 9 23240708 23243197 Phac9g02453 9 23240708 23243197 ECH