Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g02321 ATGGCCACTTCATATAAAGCATTCCTATTGAATTGCTCCATTCAGAAAAGACCCTCCCATGTCTCTGACAAATCTTCTCACTTCAACCTTCCACCCTTCCCTGCCTTTAAGCCACTCAAGAAAATTCTGCCTGGAGTCCCTTTACAAATTGATGTTCAAAAGATTATCACAGACACTGCAGCTAAATTGCTTGACGCTTTCGTAGATTCATTCTTTGAATTTGTTGACCAACCACTGCTTCCATCTCAGAGTAACTTTGCTCCGGTGGAGGAGTTGGGTGAAGCCATACTTGTTACCAGCATCCAAGGACGAATTCCAGATGATTTTCCAGAGGGTGTCTATATTAGAAATGGACCAAATCCACTTTTTGGAGGGTTAAAATCAACAAACTCTATCTTTGGGAGGTCAAGTCACATTTGGGTGGAAGGAGAGGGAATGCTTCACGCAATTTATTTTAAAAGGTCAAGTGAAGGGAGGTGGAAGGTCCTTTACAACAACAAGCACGTTGAAACCGATACATACAAGATTGAAAAGCAACTCAGCAAACCATCGTTTCTACCGGCCATAGAAGGCGACTCACTCGCCATTTTGTCTGCTTATCTGCTAAACTGGTTGCGATTTGGCAAAGCAAACAAGTACATCAGCAACACCAATGTGTTTGAGCATTCTGGCAAGTTTTACTCGGTTGCCGAAAATCACATTCCTCAAGAGATTGATATCTTCACACTAAAAACTTTAAGAAATTGGGATGTCAATGGCGCCTGGGATCGTCCTTTTACCAGTCATCCAAAGAAGGCTCCAGATACGGGGGAGCTAGTCACATTAGGGGTTGCAGCAACCAAACCTTTTGCCGTTGCTGGGATTATTTCTGCTGATGGAGAGAAATTGGTTCGAAAAGTTGACCTCCAACTCAATAGGTCCACTCTTTGTCATGACATTGGTGTTACAAAGAGGTACAATGTGATCATGGATTTTCCTCTAACTATTGATCTAAACAGAGTTCTTAGAGGAGGACAATTAATAAAATACAATAAGGAGGAATACGCAAGGATTGGGATACTGCCACGCTATGGTGATGCCAACTCAATCAAATGGTTTGAGGTGGAACCTAATTGCACTTTTCACATTATCAACTCTTTTGAGGATGGGCACGAGGTTGTAGTGAGGGGTTGCAGATCTCTAGATTCACTAATTCCTGGACCTGTCCTAAGTTTGAAGGAATACGAGTGGTTATCTCGCTGTTACGAATGGCGATTGAATATGCACACTGGAGAAGTCAAGGAGAAAGATATCTGTGGAGCCAACGTAGTTTATATGGATTTTCCTGTGATCAATGGAAACTTCATAGGAGTGAGGAATAGATATGCATACACCCAAGTAGTCGATCCAATTGCAAGCTCTACTCAAGACGCGCCAAAATATGGAGGCTTAGCAAAACTCTACTTCGAAGGATCCTGTACAGAGTTCTCCATGGTAAGAGAATGCTTGCACAACACGTTTTACTGA 1506 0.4236 MATSYKAFLLNCSIQKRPSHVSDKSSHFNLPPFPAFKPLKKILPGVPLQIDVQKIITDTAAKLLDAFVDSFFEFVDQPLLPSQSNFAPVEELGEAILVTSIQGRIPDDFPEGVYIRNGPNPLFGGLKSTNSIFGRSSHIWVEGEGMLHAIYFKRSSEGRWKVLYNNKHVETDTYKIEKQLSKPSFLPAIEGDSLAILSAYLLNWLRFGKANKYISNTNVFEHSGKFYSVAENHIPQEIDIFTLKTLRNWDVNGAWDRPFTSHPKKAPDTGELVTLGVAATKPFAVAGIISADGEKLVRKVDLQLNRSTLCHDIGVTKRYNVIMDFPLTIDLNRVLRGGQLIKYNKEEYARIGILPRYGDANSIKWFEVEPNCTFHIINSFEDGHEVVVRGCRSLDSLIPGPVLSLKEYEWLSRCYEWRLNMHTGEVKEKDICGANVVYMDFPVINGNFIGVRNRYAYTQVVDPIASSTQDAPKYGGLAKLYFEGSCTEFSMVRECLHNTFY* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g02321 501 Pfam Retinal pigment epithelial membrane protein 87 484 IPR004294 GO:0016702
Phac9g02321 501 PANTHER BETA-CAROTENE DIOXYGENASE 94 483 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g02321 Phac-Chr9 22062896 22068926 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g02321 - - pvu:PHAVU_009G109200g 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g02321 9 22062896 22068926 Phac9g02321 9 22062896 22068926 ECH